iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014680

UUCD1 version

UUC-BrD-01203

Ensembl Protein ID

BRADI2G07750.1

UniProt Accession

I1HDJ4; I1HDJ4_BRADI

Protein Name

RING-type E3 ubiquitin transferase

Gene Name

LOC100836629

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI2G07750	BRADI2G07750.1	BRADI2G07750.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.90e-25	88.7	425	495
E3 adaptor/Cullin RING/DCX/DWD	1.50e-11	44.7	1178	1211

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedl.vPnltlrrliqawcee 71
           +p++f+CpI+ +++ dPv+l++G+ty+r++I++wl++g+ tcP+trq+l    l + n++l+rli  w+++
   Q: 425  TPKDFVCPITSQVFDDPVTLETGQTYERRAIQEWLDRGNATCPITRQRLLGGALpKTNYVLKRLIAGWRDQ 495
           79****************************************************9*************987 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtg 33
           Ht  +++l++  s+  l sGs D ti+vW +r+g
   Q: 1178 HTKAISSLSLlhSEEKLYSGSLDRTIRVWQFRDG 1211
           9999*****9976699**************9987 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MAGGPTPTYS AVVAHAAAFL AELIADPLLR RHLLSAAAAA DGGGGQQHSA ATLQALSLIS 60
DALDMSSASG SPSPSSLRAA ERLLQSLPAA TPLSCLLLAL ASGARRAGGR ASAASAASAV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGGGG GCCCGACGCC GACGTACTCC GCCGTGGTGG CGCACGCGGC CGCGTTCCTC 60
GCGGAGCTCA TCGCCGACCC GCTCCTCCGG CGCCACCTCC TCTCCGCGGC CGCCGCCGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04564--U-box
PF00400--WD40

SMART

SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000289	Aegilops tauschii	83.27	0.00e+00	1569.00
IUUC-Atr-002936	Amborella trichopoda	46.78	0.00e+00	938.00
IUUC-Gma-044085	Glycine max	45.10	0.00e+00	1043.00
IUUC-Hvu-047711	Hordeum vulgare	79.23	0.00e+00	626.00
IUUC-Lpe-051224	Leersia perrieri	69.32	0.00e+00	1380.00
IUUC-Mtr-058452	Medicago truncatula	44.06	0.00e+00	992.00
IUUC-Mac-064685	Musa acuminata	58.09	0.00e+00	1125.00
IUUC-Obr-076347	Oryza brachyantha	69.29	0.00e+00	1511.00
IUUC-Ogl-077695	Oryza glaberrima	74.53	0.00e+00	1496.00
IUUC-Ogu-078873	Oryza glumaepatula	73.46	0.00e+00	1483.00
IUUC-Oin-079745	Oryza indica	79.21	0.00e+00	756.00
IUUC-Olo-081050	Oryza longistaminata	72.43	0.00e+00	706.00
IUUC-Ome-081604	Oryza meridionalis	71.61	0.00e+00	876.00
IUUC-Oni-082155	Oryza nivara	71.27	0.00e+00	851.00
IUUC-Opu-083775	Oryza punctata	71.04	0.00e+00	789.00
IUUC-Oru-084628	Oryza rufipogon	67.75	0.00e+00	834.00
IUUC-Osa-086224	Oryza sativa	70.98	9.00e-135	472.00
IUUC-Pop-099122	Populus trichocarpa	49.77	0.00e+00	782.00
IUUC-Ppe-101249	Prunus persica	51.65	0.00e+00	939.00
IUUC-Smo-109545	Selaginella moellendorffii	34.80	8.00e-135	474.00
IUUC-Sit-110152	Setaria italica	75.95	0.00e+00	1432.00
IUUC-Sly-111919	Solanum lycopersicum	48.59	0.00e+00	939.00
IUUC-Stu-111946	Solanum tuberosum	50.20	0.00e+00	971.00
IUUC-Sbi-114464	Sorghum bicolor	71.13	0.00e+00	1629.00
IUUC-Tca-121369	Theobroma cacao	53.02	0.00e+00	1033.00
IUUC-Tae-123295	Triticum aestivum	81.45	0.00e+00	1868.00
IUUC-Tur-126163	Triticum urartu	78.81	0.00e+00	1260.00
IUUC-Vvi-131144	Vitis vinifera	49.11	0.00e+00	1104.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence