iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lpe-051224

Ensembl Protein ID

LPERR01G08140.1

UniProt Accession

A0A0D9UYS1; A0A0D9UYS1_9ORYZ

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
LPERR01G08140	LPERR01G08140.1	LPERR01G08140.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-11	44.5	988	1020
E3 activity/RING/U-box	1.30e-24	86.9	314	387

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrt 32
           Ht  +t+la   s++ l sGs D ti+vW lr+
   Q: 988  HTKAITSLAVlqSEDKLFSGSLDRTIRVWQLRD 1020
           999******777669**************9987 PP

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpl..teedl.vPnltlrrliqawceen 72
           +p++f+CpI+ +++ dPv+l++G+ty+r++I++wl++g++tcP+trq+l  + + l   n +l+rli +w+++ 
   Q: 314  TPKDFVCPITSQVFDDPVTLETGQTYERRAIQEWLDRGNSTCPITRQRLhrSAHHLpNTNFVLKRLIASWRDTT 387
           69***********************************************6433333455679********9875 PP

Organism

Leersia perrieri

Protein Sequence
(Fasta)

MAGPTPTYAS VVAHAATFLA ELIADPLLRR HLLSAAAAGK RHPAATLQAL SLVSDALDTA 60
SPPSPSTPAM RVLSLMSGAQ AEEARELERE YEKVLDANCR SYALYLRNIL DAGDAAITSP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGGTC CGACGCCGAC GTACGCGTCG GTGGTGGCGC ACGCCGCCAC CTTCCTCGCG 60
GAGCTCATCG CCGACCCGCT CCTCCGCCGC CACCTCCTCT CCGCCGCCGC CGCCGGGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04564--U-box
PF00400--WD40

SMART

SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000289	Aegilops tauschii	72.90	0.00e+00	1322.00
IUUC-Atr-002936	Amborella trichopoda	47.59	0.00e+00	752.00
IUUC-Bdi-014680	Brachypodium distachyon	65.98	0.00e+00	802.00
IUUC-Gma-044256	Glycine max	49.32	0.00e+00	907.00
IUUC-Hvu-047711	Hordeum vulgare	63.98	4.00e-138	483.00
IUUC-Mtr-058452	Medicago truncatula	45.31	0.00e+00	890.00
IUUC-Mac-064685	Musa acuminata	56.77	0.00e+00	1023.00
IUUC-Obr-076347	Oryza brachyantha	74.37	0.00e+00	1498.00
IUUC-Ogl-077695	Oryza glaberrima	78.04	0.00e+00	1477.00
IUUC-Ogu-078873	Oryza glumaepatula	77.92	0.00e+00	1507.00
IUUC-Oin-079745	Oryza indica	84.28	0.00e+00	764.00
IUUC-Olo-081050	Oryza longistaminata	75.83	0.00e+00	709.00
IUUC-Ome-081604	Oryza meridionalis	78.16	0.00e+00	1488.00
IUUC-Oni-082155	Oryza nivara	78.52	0.00e+00	1458.00
IUUC-Opu-083775	Oryza punctata	71.52	0.00e+00	1337.00
IUUC-Oru-084628	Oryza rufipogon	76.48	0.00e+00	1454.00
IUUC-Osa-086224	Oryza sativa	74.24	8.00e-140	489.00
IUUC-Pop-099122	Populus trichocarpa	46.83	0.00e+00	710.00
IUUC-Ppe-101249	Prunus persica	52.20	0.00e+00	844.00
IUUC-Sha-107565	Sarcophilus harrisii	29.03	3.00e-08	53.50
IUUC-Smo-109545	Selaginella moellendorffii	33.95	2.00e-123	436.00
IUUC-Sit-110152	Setaria italica	73.94	0.00e+00	1313.00
IUUC-Sly-111919	Solanum lycopersicum	48.59	0.00e+00	856.00
IUUC-Stu-111946	Solanum tuberosum	43.41	0.00e+00	880.00
IUUC-Sbi-114464	Sorghum bicolor	65.62	0.00e+00	1410.00
IUUC-Tca-121369	Theobroma cacao	51.77	0.00e+00	932.00
IUUC-Tae-123295	Triticum aestivum	70.49	0.00e+00	1484.00
IUUC-Tur-126163	Triticum urartu	76.58	0.00e+00	1114.00
IUUC-Vvi-131144	Vitis vinifera	52.85	0.00e+00	981.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence