iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131144

UUCD1 version

UUC-ViV-00202

Ensembl Protein ID

VIT_11s0016g03590.t01

UniProt Accession

D7TBK5; D7TBK5_VITVI

Genbank Protein ID

CBI28040.3

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

FN595756

Gene Name

VIT_11s0016g03590

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_11s0016g03590	VIT_11s0016g03590.t01	VIT_11s0016g03590.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.30e-27	95.4	210	281
E3 adaptor/Cullin RING/DCX/DWD	2.10e-12	47.4	914	943

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedl.vPnltlrrliqawceen 72
           +p++f+CpI+  ++ dPv+l++G+ty+r++I++w+++g++tcP+trq+l++++l + n++l+rli +w e+n
   Q: 210  PPKDFICPITSHIFDDPVTLETGQTYERKAIQEWIDRGNSTCPITRQKLHSTQLpKTNYVLKRLIASWQEQN 281
           79******************************************************************9998 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWD 29
           Ht  vt+la   s+ +l sGs D t ++W+
   Q: 914  HTKAVTSLAIleSGERLYSGSLDRTARIWS 943
           999******888889**************9 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MSGGQTSELK ELERDYEEVL DENCRLLVGY FREVLGNENG SRLIRPPSLI FEKTRKSDEF 60
KFNEDEQNKV EEIGLGNGRY NNPTWTEGER SVEFYSSGSS SKSKSPPFYP QRVSLKILRN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCGGCG GTCAAACTTC GGAGCTTAAG GAATTGGAGC GGGACTATGA GGAGGTTCTC 60
GATGAGAATT GCAGGCTTTT AGTTGGGTAC TTCAGAGAGG TTCTGGGCAA TGAAAATGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04564--U-box
PF00400--WD40

SMART

SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000289	Aegilops tauschii	54.86	0.00e+00	1014.00
IUUC-Atr-002936	Amborella trichopoda	50.08	0.00e+00	1146.00
IUUC-Bdi-014680	Brachypodium distachyon	49.35	0.00e+00	1070.00
IUUC-Gma-044085	Glycine max	62.92	0.00e+00	1427.00
IUUC-Hvu-047711	Hordeum vulgare	51.36	5.00e-109	386.00
IUUC-Lpe-051224	Leersia perrieri	52.44	0.00e+00	870.00
IUUC-Mtr-058452	Medicago truncatula	63.48	0.00e+00	1370.00
IUUC-Mac-064685	Musa acuminata	63.75	0.00e+00	1184.00
IUUC-Obr-076347	Oryza brachyantha	48.49	0.00e+00	997.00
IUUC-Ogl-077695	Oryza glaberrima	54.68	0.00e+00	877.00
IUUC-Ogu-078873	Oryza glumaepatula	54.74	0.00e+00	909.00
IUUC-Oin-079745	Oryza indica	57.37	3.00e-151	528.00
IUUC-Olo-081050	Oryza longistaminata	52.94	1.00e-145	509.00
IUUC-Ome-081604	Oryza meridionalis	47.53	0.00e+00	914.00
IUUC-Oni-082155	Oryza nivara	53.11	0.00e+00	872.00
IUUC-Oru-084628	Oryza rufipogon	51.14	0.00e+00	861.00
IUUC-Osa-086224	Oryza sativa	52.12	9.00e-94	336.00
IUUC-Pop-099122	Populus trichocarpa	71.63	0.00e+00	1118.00
IUUC-Ppe-101249	Prunus persica	70.00	0.00e+00	1420.00
IUUC-Sit-110152	Setaria italica	57.65	0.00e+00	1050.00
IUUC-Sly-111919	Solanum lycopersicum	61.33	0.00e+00	1283.00
IUUC-Stu-111946	Solanum tuberosum	62.36	0.00e+00	1377.00
IUUC-Sbi-114464	Sorghum bicolor	53.87	0.00e+00	1040.00
IUUC-Tca-121369	Theobroma cacao	71.39	0.00e+00	1598.00
IUUC-Tae-123295	Triticum aestivum	50.33	0.00e+00	1081.00
IUUC-Tur-126163	Triticum urartu	54.05	0.00e+00	814.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence