iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113853

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G147300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g012750	Sb03g012750.1	Sb03g012750.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.40e-08	35.9	144	186

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl ++   ++  + lp CgH fh +C+ +w       +++++CPlCr
   Q: 144  CAVCLAELepgEK-ARALPrCGHRFHVECIDAW------FRGNATCPLCR 186
           ******9977544.888888*************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGAGAGDGTL PKVGEVAMSC DDGPGQVPFS KRPHVPDPGP PQQVSDPANY AVAGKILLAV 60
AGAFAGVLLA LVALHLYSST RRRRLGLGGG GGQRRLLRSL AIAGGGDEDR RDGALPSPRG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCGCCG GCGCAGGCGA CGGCACGCTC CCCAAGGTCG GCGAGGTGGC GATGTCGTGC 60
GACGATGGTC CGGGCCAGGT CCCGTTCTCC AAGCGCCCGC ACGTCCCCGA CCCCGGCCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_03g012750

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014898	Brachypodium distachyon	58.18	2.00e-23	101.00
IUUC-Hvu-047051	Hordeum vulgare	64.60	2.00e-29	121.00
IUUC-Lpe-051273	Leersia perrieri	65.18	4.00e-26	110.00
IUUC-Ogl-077172	Oryza glaberrima	65.45	3.00e-28	117.00
IUUC-Ogu-078440	Oryza glumaepatula	49.62	8.00e-30	122.00
IUUC-Oin-079917	Oryza indica	64.91	2.00e-30	124.00
IUUC-Ome-081098	Oryza meridionalis	47.51	3.00e-24	105.00
IUUC-Oni-082179	Oryza nivara	48.44	7.00e-29	120.00
IUUC-Oru-084521	Oryza rufipogon	48.22	3.00e-28	119.00
IUUC-Osa-085441	Oryza sativa	64.91	2.00e-30	125.00
IUUC-Sit-110778	Setaria italica	63.20	1.00e-27	115.00
IUUC-Tae-123261	Triticum aestivum	89.19	6.00e-17	80.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence