iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015720

Ensembl Protein ID

Bo7g115780.1

UniProt Accession

A0A0D3DHD0; A0A0D3DHD0_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo7g115780	Bo7g115780.1	Bo7g115780.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-23	83.7	664	693
UBD/Beta-Prp	1.70e-47	163.6	616	752

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           Ht+ +t+++f ++ ++l+++s D+t++vWD
   Q: 664  HTAMITDVRFsPSlPRLATSSFDKTVRVWD 693
           88889******999**************** PP

UBD/Beta-Prp

   S: 45   lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvn 141
           + s+   ++++t++ fs+dgk+l++++ D+ + +w  +t k+  tl++h++++++++fsps  +l++ s d+t+rvwd +++  +   + gh+++v+
   Q: 616  VNSVRASTSKITSCHFSSDGKMLASAGHDKKAVIWYTDTMKPKTTLEEHTAMITDVRFSPSLPRLATSSFDKTVRVWDADNKGYSLRNFIGHSSMVT 712
           4444455555999999999999999999999999999999999999999999999999999999999999999999998775444449999999999 PP
   S: 142  cvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgght 180
           ++ +hp++ +l+ s+ +D+ +r W++++g++ r  +gg t
   Q: 713  SLDFHPNKdDLICSCDNDGEIRYWSINNGSCTRVYKGGST 752
           9999999999999999999999999999999998887655 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MSQTNWEADK MLDVYIYDYL VKRDLKATAQ AFQAEGKVSS DPVAIDAPGG FLFEWWSVFW 60
DIFIARTNEK HSEVAASYIE TQMIKAREQQ MQQSQHPQVS QQQQQQQQQQ IQMQQLLLQR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTCAGA CCAACTGGGA AGCTGATAAA ATGTGAGTTT TTTTTTCTTC TCACTTAGAT 60
TCTGCTGCTT GCTACTGAAA GACGTTACCT TTAGGTTCTG GGTGTTTTTT GCTTGGTTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

SMART

SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000855	Aegilops tauschii	56.06	0.00e+00	678.00
IUUC-Atr-002973	Amborella trichopoda	70.25	0.00e+00	793.00
IUUC-Aly-006446	Arabidopsis lyrata	88.52	0.00e+00	1196.00
IUUC-Ath-006594	Arabidopsis thaliana	83.86	0.00e+00	1171.00
IUUC-Bdi-014395	Brachypodium distachyon	59.92	0.00e+00	723.00
IUUC-Bra-017088	Brassica rapa	97.25	0.00e+00	1230.00
IUUC-Gma-043258	Glycine max	74.87	0.00e+00	920.00
IUUC-Lpe-051536	Leersia perrieri	58.36	0.00e+00	729.00
IUUC-Mtr-058613	Medicago truncatula	71.07	0.00e+00	918.00
IUUC-Mac-064770	Musa acuminata	64.04	0.00e+00	832.00
IUUC-Oin-079642	Oryza indica	56.32	0.00e+00	693.00
IUUC-Olo-080338	Oryza longistaminata	55.99	3.00e-179	621.00
IUUC-Ome-081901	Oryza meridionalis	56.59	0.00e+00	665.00
IUUC-Pop-098994	Populus trichocarpa	74.47	0.00e+00	989.00
IUUC-Ppe-102018	Prunus persica	74.43	0.00e+00	950.00
IUUC-Smo-109593	Selaginella moellendorffii	49.54	3.00e-178	618.00
IUUC-Sit-109866	Setaria italica	59.81	0.00e+00	729.00
IUUC-Sly-110921	Solanum lycopersicum	70.60	0.00e+00	866.00
IUUC-Sbi-113848	Sorghum bicolor	58.91	0.00e+00	719.00
IUUC-Tca-121720	Theobroma cacao	72.69	0.00e+00	920.00
IUUC-Tae-124426	Triticum aestivum	58.54	0.00e+00	719.00
IUUC-Tur-126743	Triticum urartu	52.80	0.00e+00	630.00
IUUC-Vvi-131473	Vitis vinifera	71.05	0.00e+00	944.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence