iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043858

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000847

Gene Name

LOC100779972; GLYMA_14G128300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA14G16040	GLYMA14G16040.1	GLYMA14G16040.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-25	89.7	654	684
UBD/Beta-Prp	3.50e-45	156.1	602	744

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           H+  +t+++f ++ ++l+++s+D+t++vWD+
   Q: 654  HAYLITDVRFsPSmPRLATSSYDKTVRVWDV 684
           8889*******777****************7 PP

UBD/Beta-Prp

   S: 83   tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlkt.gkllrtl 175
           t++ + ++++ +++v++++fs +g+ l+sG+hd+ + +w +++ +    tl++h  +++ v+++p+   l+++s+D+tvr+Wd+++ g  lrt+
   Q: 602  TFSEINSVRASTNKVVCCHFSSDGKLLASGGHDKKAVLWFTDSLKQKA-TLEEHAYLITDVRFSPSMPRLATSSYDKTVRVWDVENpGYSLRTF 694
           445556666777777777777777777777777777777777777777.777777777777777777777777777777777774426677777 PP
   S: 176  tgghtdsvyslsfdsng.kelvsgsldgtvklwdlqtgecvrtlnghtdnv 225
           tg h +sv sl+f++n+   + s++ dg +++w++ +g+c r  +g t+++
   Q: 695  TG-HSSSVMSLDFHPNKdDLICSCDVDGEIRYWSINNGSCARVSKGGTAQM 744
           77.777777777777774445677777777777777777777777766655 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MSQTNWEADK MLDVYIHDYL VKRDLKASAQ AFQAEGKVSS DPVAIDAPGG FLFEWWSVFW 60
DIFIARTNEK HSEVAASYIE TQLIKAREQQ QQQQQPQPQQ SQHQQQQQQQ QQQQQQQHMQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCATTCCTT CTGTGTGTGT CTCTCTGCTA CACCAAATGC TTTCTTGCCA TTGCTACTGT 60
TGAGTTTCAC AAACATTCAC CAAACTCATT CATTCTCTCA TTACCCATCA ATATTTATTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

SMART

SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002977	Amborella trichopoda	59.92	0.00e+00	780.00
IUUC-Bdi-014395	Brachypodium distachyon	61.42	0.00e+00	741.00
IUUC-Hvu-047499	Hordeum vulgare	67.20	3.00e-156	544.00
IUUC-Lpe-051536	Leersia perrieri	61.25	0.00e+00	777.00
IUUC-Mac-064770	Musa acuminata	65.57	0.00e+00	857.00
IUUC-Ogl-077064	Oryza glaberrima	61.62	0.00e+00	757.00
IUUC-Oin-079642	Oryza indica	60.91	0.00e+00	744.00
IUUC-Olo-080338	Oryza longistaminata	60.75	0.00e+00	667.00
IUUC-Ome-081901	Oryza meridionalis	59.84	0.00e+00	717.00
IUUC-Osa-086142	Oryza sativa	61.76	0.00e+00	759.00
IUUC-Ppa-095985	Physcomitrella patens	67.62	3.00e-160	558.00
IUUC-Pop-099327	Populus trichocarpa	77.09	0.00e+00	1000.00
IUUC-Smo-108724	Selaginella moellendorffii	57.09	0.00e+00	725.00
IUUC-Sly-110921	Solanum lycopersicum	75.40	0.00e+00	954.00
IUUC-Sbi-113848	Sorghum bicolor	60.94	0.00e+00	765.00
IUUC-Tca-121758	Theobroma cacao	62.17	0.00e+00	766.00
IUUC-Tae-124426	Triticum aestivum	61.76	0.00e+00	760.00
IUUC-Tur-126626	Triticum urartu	65.95	3.00e-148	519.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence