iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ome-081901

Ensembl Protein ID

OMERI01G20500.2

UniProt Accession

A0A0E0C4I0; A0A0E0C4I0_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OMERI01G20500	OMERI01G20500.1	OMERI01G20500.1
OMERI01G20500	OMERI01G20500.2	OMERI01G20500.2
OMERI01G20500	OMERI01G20500.3	OMERI01G20500.3
OMERI01G20500	OMERI01G20500.4	OMERI01G20500.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.40e-36	122.3	1288	1317
UBD/Beta-Prp	3.30e-70	237.6	1246	1526

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           H++ +t+++f ++  +l+++s D+t++vWD
   Q: 1288 HSALITDVRFsPSmSRLATSSFDKTVRVWD 1317
           999********66799************** PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkl.lrslsgheaevtavkfspdgkilvtgseDrtikvwdls.tgkcvhtlkghedsvls 99
            + +tc +fs d++llatg+ d+++ +w +++  +  +sl++h+a +t+v+fsp+ + l+t+s D+t++vwd + t+  ++t++gh++sv+s
   Q: 1246 ATKVTCCHFSSDGKLLATGGHDKKVLLWCTEPALKpTSSLEEHSALITDVRFSPSMSRLATSSFDKTVRVWDADnTSYSLRTFTGHSASVMS 1337
           456899*************************9766899**********************************9967788************* PP
   S: 100  lsfspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfd 189
           l+f+p++ d + s + d  +r w +++g+cl    ++ +g  + ++++p++ ++l+++s  +++ + d +t+   r   +ght+ ++sl +d
   Q: 1338 LDFHPNKeDMICSCDGDGEVRSWSINNGSCLT-YVKVFKGGATQMRFQPQKgKYLAAAS-EKAIYILDGETQLACRNPLQGHTKNIHSLCWD 1427
           *****888***********************9.99999999999999999967666665.799999***999877776455*********** PP
   S: 190  sngkelvsgsldgtvklwdlq...tgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdn 278
           s+g  l+s+s+d +v++w++     ge v++ln+  + ++s  f+p   +l+s        +Wd+r ++ +++ + h   v + a+ s    
   Q: 1428 STGDNLASVSED-SVRIWSFApghDGEFVNELNCSGNKFQSCVFHPSYPYLLSL------ELWDIREKNAMTVHSAHDGLVAALAA-SSATG 1511
           **********99.69******9999********************888888876......6*****************99999999.55566 PP
   S: 279  vlvlgsedskvniwk 293
           +++++s d  v++wk
   Q: 1512 KVASVSHDRFVKLWK 1526
           778999999999997 PP

Organism

Oryza meridionalis

Protein Sequence
(Fasta)

MYIYDYFVKR NLQTTAKAFQ SEGNVSTDPV AIDAPGGFLF EWWSIFWDIF IAQTDREHSD 60
VATLNKQKQS IKNNSNNNII INNISINKYK CNKCYYKELH NNNNNNNNNN NNNNNNNNNN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTGGACATG TACATATATG ACTATTTTGT CAAGAGAAAT TTACAGACAA CAGCAAAAGC 60
CTTCCAATCA GAAGGAAATG TCTCAACGGA TCCAGTTGGT ATGCATCTCC TTGATTCTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0853--WD repeat

Interpro

IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000855	Aegilops tauschii	79.89	0.00e+00	961.00
IUUC-Atr-002973	Amborella trichopoda	61.88	0.00e+00	685.00
IUUC-Aly-006446	Arabidopsis lyrata	58.34	0.00e+00	701.00
IUUC-Ath-006594	Arabidopsis thaliana	55.69	0.00e+00	684.00
IUUC-Bdi-015034	Brachypodium distachyon	82.46	0.00e+00	1038.00
IUUC-Bol-015720	Brassica oleracea	57.14	0.00e+00	677.00
IUUC-Bra-017481	Brassica rapa	56.86	0.00e+00	702.00
IUUC-Gma-043858	Glycine max	69.14	5.00e-152	531.00
IUUC-Hvu-047773	Hordeum vulgare	87.04	0.00e+00	652.00
IUUC-Lpe-051536	Leersia perrieri	90.80	0.00e+00	1157.00
IUUC-Mac-065234	Musa acuminata	61.40	0.00e+00	742.00
IUUC-Oba-075753	Oryza barthii	89.74	0.00e+00	987.00
IUUC-Obr-076415	Oryza brachyantha	92.59	0.00e+00	1107.00
IUUC-Ogl-077031	Oryza glaberrima	98.35	0.00e+00	1167.00
IUUC-Ogu-078070	Oryza glumaepatula	93.24	0.00e+00	988.00
IUUC-Oin-079642	Oryza indica	98.49	0.00e+00	1168.00
IUUC-Olo-080338	Oryza longistaminata	98.95	0.00e+00	1055.00
IUUC-Oni-082450	Oryza nivara	89.74	0.00e+00	987.00
IUUC-Opu-083133	Oryza punctata	86.11	1.00e-178	619.00
IUUC-Oru-085189	Oryza rufipogon	91.20	0.00e+00	1045.00
IUUC-Osa-085738	Oryza sativa	98.35	0.00e+00	1167.00
IUUC-Pop-098994	Populus trichocarpa	62.35	0.00e+00	734.00
IUUC-Ppe-102018	Prunus persica	59.02	0.00e+00	702.00
IUUC-Smo-109607	Selaginella moellendorffii	49.74	2.00e-161	562.00
IUUC-Sit-109866	Setaria italica	85.12	0.00e+00	1043.00
IUUC-Sly-110921	Solanum lycopersicum	60.13	0.00e+00	697.00
IUUC-Sbi-113848	Sorghum bicolor	83.31	0.00e+00	999.00
IUUC-Tae-125267	Triticum aestivum	81.62	0.00e+00	1006.00
IUUC-Tur-126743	Triticum urartu	66.16	0.00e+00	792.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence