iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131528

UUCD1 version

UUC-ViV-00997

Ensembl Protein ID

VIT_03s0038g02390.t01

UniProt Accession

A5AP73; A5AP73_VITVI

Genbank Protein ID

CAN73628.1; CBI37874.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

AM431253; FN596508

Gene Name

UBC29; VIT_03s0038g02390; VITISV_026640

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_03s0038g02390	VIT_03s0038g02390.t01	VIT_03s0038g02390.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	2.90e-55	186.4	5	139
UBD/UBC-like/UBD_UBC	2.00e-72	242.3	5	142

Active Site

Position(s)	Description	Evidence
85	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilke 88
           R+ kelk+l++dpp+++sa+pv e d+++w+++i+Gp+d+pY ggvF ++i+fp+dYPfkPPkv f tk+fhPn+++nG++Cl+ilk 
   Q: 5    RIVKELKDLQRDPPTSCSAGPVAE-DMFHWQATIIGPNDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGNICLDILK- 90
           899*********************.9************************************************************9. PP
   S: 89   eekWspalsvesvllsiqsllaepnpesplneeaaellkknreeykkkvr 138
            e+Wspal++++vllsi+sll++pnp++pl  e+a+l+k+++ +y++++r
   Q: 91   -EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHLCKTDKVKYESTAR 139
           .*********************************************9987 PP

UBD/UBC-like/UBD_UBC

   S: 1    rikkelkdllrdeeaqisadlvdddlfelratiagppdspyeggvffltiklptdypfkppkvafitkiyhpninsngsicldilrsq 88
           ri kelkdl+rd+++ +sa++v +d+f+++ati+gp+dspy ggvf +ti++p dypfkppkvaf tk++hpninsng icldil++q
   Q: 5    RIVKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGNICLDILKEQ 92
           899************************************************************************************* PP
   S: 89   wsaaltlskvllslcslladaepddplvaeiariyktdkekykriarewt 138
           ws+alt+skvlls+csll+d++pddplv+eia++ ktdk ky+ +ar wt
   Q: 93   WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHLCKTDKVKYESTARSWT 142
           *************************************************8 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MASKRIVKEL KDLQRDPPTS CSAGPVAEDM FHWQATIIGP NDSPYSGGVF LVTIHFPPDY 60
PFKPPKVAFR TKVFHPNINS NGNICLDILK EQWSPALTIS KVLLSICSLL TDPNPDDPLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGGGTGTAC GTGTTTCATT TCCCTTTGCA TTCTCATCTT CCCTCTTGAA TTTCTCCTCT 60
CAGTTTAAGA ATTACTACTG CTCAAATTGC TACAATGGCA TCAAAGAGAA TTGTGAAAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005524--F:ATP binding

KEGG

vvi:100248604

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002807	Amborella trichopoda	92.57	3.00e-81	292.00
IUUC-Gma-042765	Glycine max	97.30	1.00e-84	304.00
IUUC-Lpe-051317	Leersia perrieri	91.89	3.00e-82	296.00
IUUC-Mtr-058645	Medicago truncatula	95.95	3.00e-84	302.00
IUUC-Oba-075063	Oryza barthii	91.22	3.00e-81	292.00
IUUC-Obr-076691	Oryza brachyantha	91.22	8.00e-82	295.00
IUUC-Ogl-077418	Oryza glaberrima	91.22	3.00e-81	292.00
IUUC-Ogu-078890	Oryza glumaepatula	91.22	3.00e-81	292.00
IUUC-Olo-080885	Oryza longistaminata	91.22	3.00e-81	292.00
IUUC-Ome-081920	Oryza meridionalis	91.22	3.00e-81	292.00
IUUC-Oni-082139	Oryza nivara	91.22	3.00e-81	292.00
IUUC-Opu-083548	Oryza punctata	91.22	3.00e-81	292.00
IUUC-Oru-084951	Oryza rufipogon	91.22	3.00e-81	292.00
IUUC-Osa-085525	Oryza sativa	91.22	3.00e-81	292.00
IUUC-Pop-099982	Populus trichocarpa	95.95	4.00e-84	301.00
IUUC-Ppe-101710	Prunus persica	98.65	2.00e-85	306.00
IUUC-Sit-109964	Setaria italica	91.22	7.00e-81	291.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence