iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d053897	Zm00001d053897_T002	Zm00001d053897_T002
Zm00001d053897	Zm00001d053897_T001	Zm00001d053897_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	1.40e-54	185.6	5	139
UBD/UBC-like/UBD_UBC	2.00e-71	240.5	5	142

Active Site

Position(s)	Description	Evidence
85	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkeee 90
           R+ kelk+l++dpp+++sa+pv++ d+++w+++i+Gp+d+pY ggvF + i+fp+dYPfkPPkv f tk+fhPn+++nG++Cl+ilk  e
   Q: 5    RIIKELKDLQRDPPTSCSAGPVSD-DMFHWQATIMGPSDSPYSGGVFLVAIHFPPDYPFKPPKVAFKTKVFHPNINSNGSICLDILK--E 91
           899*********************.9************************************************************9..* PP
   S: 91   kWspalsvesvllsiqsllaepnpesplneeaaellkknreeykkkvr 138
           +Wspal+v++vlls++sll++pnp++pl  e+a+++k++r +y++++r
   Q: 92   QWSPALTVSKVLLSVCSLLTDPNPDDPLVPEIAHMCKTDRLRYESTAR 139
           ********************************************9886 PP

UBD/UBC-like/UBD_UBC

   S: 1    rikkelkdllrdeeaqisadlvdddlfelratiagppdspyeggvffltiklptdypfkppkvafitkiyhpninsngsicldilrsqws 90
           ri kelkdl+rd+++ +sa++v dd+f+++ati+gp+dspy ggvf + i++p dypfkppkvaf tk++hpninsngsicldil++qws
   Q: 5    RIIKELKDLQRDPPTSCSAGPVSDDMFHWQATIMGPSDSPYSGGVFLVAIHFPPDYPFKPPKVAFKTKVFHPNINSNGSICLDILKEQWS 94
           899*************************************************************************************** PP
   S: 91   aaltlskvllslcslladaepddplvaeiariyktdkekykriarewt 138
           +alt+skvlls+csll+d++pddplv+eia++ ktd+ +y+ +ar wt
   Q: 95   PALTVSKVLLSVCSLLTDPNPDDPLVPEIAHMCKTDRLRYESTARGWT 142
           ***********************************************8 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MALRRIIKEL KDLQRDPPTS CSAGPVSDDM FHWQATIMGP SDSPYSGGVF LVAIHFPPDY 60
PFKPPKVAFK TKVFHPNINS NGSICLDILK EQWSPALTVS KVLLSVCSLL TDPNPDDPLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGAGAGAGG CCCTGCGCTG CAAATCCTCG GTGGTTTTGC AGCTTCCAGA GCTTGAGATT 60
GAGACCAGCG CGGCAGTTCT TTCTTGGTCG TCGATGGCGC TGAGGAGGAT CATCAAGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005524--F:ATP binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

zma:103654927

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000324	Aegilops tauschii	83.73	3.00e-78	283.00
IUUC-Csv-025835	Ciona savignyi	73.97	5.00e-56	209.00
IUUC-Cne-026957	Cryptococcus neoformans	76.71	6.00e-68	248.00
IUUC-Hvu-047354	Hordeum vulgare	93.29	2.00e-81	293.00
IUUC-Lpe-051317	Leersia perrieri	94.59	3.00e-83	300.00
IUUC-Mac-064642	Musa acuminata	89.19	4.00e-79	285.00
IUUC-Oba-075063	Oryza barthii	95.27	3.00e-83	299.00
IUUC-Obr-076691	Oryza brachyantha	95.27	7.00e-84	302.00
IUUC-Ogl-077418	Oryza glaberrima	95.27	3.00e-83	299.00
IUUC-Ogu-078890	Oryza glumaepatula	95.27	3.00e-83	299.00
IUUC-Olo-080885	Oryza longistaminata	95.27	3.00e-83	299.00
IUUC-Ome-081920	Oryza meridionalis	95.27	3.00e-83	299.00
IUUC-Oni-082139	Oryza nivara	95.27	3.00e-83	299.00
IUUC-Opu-083548	Oryza punctata	95.27	3.00e-83	299.00
IUUC-Oru-084951	Oryza rufipogon	95.27	3.00e-83	299.00
IUUC-Osa-085525	Oryza sativa	95.27	3.00e-83	299.00
IUUC-Sit-109964	Setaria italica	95.27	3.00e-83	299.00
IUUC-Sbi-114644	Sorghum bicolor	97.97	9.00e-76	274.00
IUUC-Tae-122955	Triticum aestivum	93.29	2.00e-81	293.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence