iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111027

Ensembl Protein ID

Solyc07g061780.2.1

UniProt Accession

K4CGL1; K4CGL1_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc07g061780.2	Solyc07g061780.2.1	Solyc07g061780.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.30e-75	255.5	442	748

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDa 92
           Gl N gN+CY N+vLQcL+ +++l+ +ll++ +++     +  ++ +l+++l++    l  ++ +  sp+++l ++++++ ++ + +q+Da
   Q: 442  GLINCGNSCYANAVLQCLMCTKPLTIYLLHRSHSR----TYCRKDWCLVCELEQHAMML-RESGGPLSPNKILLHMRSINGQIGNGSQEDA 527
           9*****************************33333....3456789********99666.9999*************************** PP
   S: 93   qEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetk 183
           +Efl+f++ ++++                  ++l  e+  ++  +++++i+++F+g+l+s++kcl+c+++s  +e+ +dlsl++ g  e  
   Q: 528  HEFLRFIVASMQSIS---------------LEALGGENAVDPRLQQTTFIQHTFGGRLRSKVKCLRCHHESACYENIMDLSLEIFGWVE-- 601
           ************987...............23556668999*********************************************997.. PP
   S: 184  keslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqke 274
             sl+d+L +ft++e l+gen+y c +c  +++a+k+l++++ P++L++ LkRf    +++s  kink+++fp++Ld+ pf+t ++ +   
   Q: 602  --SLEDALTQFTSPEDLDGENMYRCGRCACYVRAQKQLSIQEAPNILTIVLKRF----QEGSYGKINKCITFPDMLDMIPFMTGTD-D--I 683
           ..8***************************************************....457889********************44.3..3 PP
   S: 275  kkkYeLiavvvHsGsls...sGHYvayvkn..ekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           +  Y L+avvvH  +l+   sGHY++yvk+   +g+W+++dD++V++v++++v +   + aY+lfYkr
   Q: 684  PPLYMLYAVVVHLDTLNasfSGHYISYVKDlhLRGNWFRIDDTEVHPVSMSQVMS---EGAYILFYKR 748
           9***********997664458*********555666*******************...********98 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MLEPRETDIP TLFLVLVVLP LVSYILLGKW NEAAKKKERV GLLAQRAAEE AHKTQTMSAV 60
SITPIPLVPL PSSATHQCAR CHSPATTRCS QCKSVRYCSG KCQILHWRQV HKLECLQLGN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTCGAGC CAAGGGAAAC CGACATTCCG ACTTTATTTT TGGTCTTGGT TGTGCTTCCC 60
CTGGTTTCTT ATATTCTTCT AGGAAAATGG AATGAGGCAG CCAAAAAGAA AGAAAGAGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

sly:101256108

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000426	Aegilops tauschii	63.39	1.00e-138	486.00
IUUC-Atr-003062	Amborella trichopoda	54.75	4.00e-151	527.00
IUUC-Aly-006034	Arabidopsis lyrata	47.41	0.00e+00	734.00
IUUC-Ath-007599	Arabidopsis thaliana	47.79	0.00e+00	730.00
IUUC-Bdi-014717	Brachypodium distachyon	58.73	4.00e-161	561.00
IUUC-Bol-015616	Brassica oleracea	59.13	0.00e+00	644.00
IUUC-Bra-017955	Brassica rapa	46.40	0.00e+00	723.00
IUUC-Gma-043603	Glycine max	51.28	0.00e+00	852.00
IUUC-Lpe-051615	Leersia perrieri	56.65	1.00e-156	546.00
IUUC-Mtr-058164	Medicago truncatula	53.60	0.00e+00	830.00
IUUC-Mac-064719	Musa acuminata	57.04	4.00e-160	558.00
IUUC-Oba-075960	Oryza barthii	54.73	3.00e-159	555.00
IUUC-Obr-076330	Oryza brachyantha	45.94	0.00e+00	688.00
IUUC-Ogl-077370	Oryza glaberrima	57.92	3.00e-164	572.00
IUUC-Ogu-078615	Oryza glumaepatula	54.73	3.00e-159	555.00
IUUC-Oin-079409	Oryza indica	57.35	2.00e-165	575.00
IUUC-Olo-080550	Oryza longistaminata	54.58	2.00e-157	548.00
IUUC-Ome-081508	Oryza meridionalis	54.56	8.00e-159	553.00
IUUC-Oni-082740	Oryza nivara	54.24	5.00e-160	557.00
IUUC-Opu-083669	Oryza punctata	51.33	2.00e-139	489.00
IUUC-Oru-084502	Oryza rufipogon	54.24	5.00e-160	557.00
IUUC-Osa-085475	Oryza sativa	57.35	4.00e-165	574.00
IUUC-Olu-087767	Ostreococcus lucimarinus	38.92	2.00e-58	218.00
IUUC-Pop-099882	Populus trichocarpa	69.55	0.00e+00	759.00
IUUC-Ppe-101942	Prunus persica	54.65	0.00e+00	892.00
IUUC-Sit-109825	Setaria italica	57.97	2.00e-167	582.00
IUUC-Sbi-114225	Sorghum bicolor	57.12	2.00e-165	576.00
IUUC-Tca-121618	Theobroma cacao	53.27	0.00e+00	910.00
IUUC-Tae-123144	Triticum aestivum	65.24	1.00e-140	493.00
IUUC-Tur-126234	Triticum urartu	55.59	8.00e-159	553.00
IUUC-Vvi-131600	Vitis vinifera	54.66	0.00e+00	936.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence