iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114546

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G114200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g009330	Sb04g009330.1	Sb04g009330.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-06	29.7	150	192

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cled    + ++ lp C+H+fh +C+ +w         + +CP+Cr
   Q: 150  CSVCLEDVqgGEMVRQLPaCKHLFHVQCIDMW------LHSHRTCPVCR 192
           ********5533399999**************......99********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MPTLLSARSR GGSSNRGGEG DAGGGGAGGN RRAYYGIAAC AVALLLFCAL AVSVSVWMAF 60
LFGGLALVTF GVAGCLAREP SRSSDGASDV ADAAAGAAPR TQRRFGLPKA AINALPTFAY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGACCC TGCTCTCCGC GAGGTCCCGC GGCGGCAGCA GCAACCGCGG CGGCGAGGGC 60
GACGCCGGCG GCGGTGGGGC TGGTGGAAAC CGCCGCGCGT ACTATGGCAT CGCGGCGTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_04g009330

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-015022	Brachypodium distachyon	52.91	7.00e-34	135.00
IUUC-Lpe-051101	Leersia perrieri	47.48	1.00e-24	108.00
IUUC-Ome-081432	Oryza meridionalis	50.59	2.00e-29	120.00
IUUC-Olu-087845	Ostreococcus lucimarinus	50.94	1.00e-13	66.60
IUUC-Tae-123935	Triticum aestivum	51.43	1.00e-29	122.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence