iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017212

Ensembl Protein ID

Bra015357.1-P

UniProt Accession

M4DFT4; M4DFT4_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra015357	Bra015357.1	Bra015357.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	5.10e-07	30.6	114	154

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 2    ededkleqlveMGFdreealqaLraa.nnnleaAveyLldg 41
            d+ +le+l+ MGF++ +a +aL  + n +leaAv+++ ++
   Q: 114  VDQKLLEELEGMGFPKARATRALHYSgNASLEAAVNWVVEH 154
           5899*********************************9876 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MAGVSLKCGD CGALLKSVEE AQEHAEVTSH SNFAESTEAV LNLVCSACSK PCRSKTESDL 60
HTKRTGHTEF VDKTMETVKP ISLEAPKQPA MESDNADGSS GSGDAAEEMV VPEVDQKLLE 120

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Nucleotide Sequence
(Fasta)

ATGGCAGGAG TATCGCTCAA GTGCGGTGAT TGCGGCGCGC TGCTGAAGTC GGTGGAGGAG 60
GCTCAGGAGC ATGCGGAGGT CACCTCTCAC TCCAATTTCG CAGAGTCCAC TGAGGCGGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat

Interpro

IPR032867--DYW_dom
IPR002885--Pentatricopeptide_repeat
IPR018997--PUB_domain
IPR011990--TPR-like_helical_dom
IPR015940--UBA
IPR009060--UBA-like
IPR013087--Znf_C2H2_type

PROSITE

PS51375--PPR
PS50030--UBA
PS00028--ZINC_FINGER_C2H2_1

Pfam

PF14432--DYW_deaminase
PF01535--PPR
PF13041--PPR_2
PF09409--PUB
PF00627--UBA

SMART

SM00580--PUG
SM00165--UBA

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001103	Aegilops tauschii	64.92	4.00e-70	258.00
IUUC-Aml-002325	Ailuropoda melanoleuca	42.86	7.00e-12	64.30
IUUC-Atr-002907	Amborella trichopoda	72.40	5.00e-140	490.00
IUUC-Bol-016537	Brassica oleracea	97.34	0.00e+00	701.00
IUUC-Cin-025658	Ciona intestinalis	42.22	1.00e-07	47.40
IUUC-Gma-042684	Glycine max	78.69	7.00e-150	523.00
IUUC-Lpe-051322	Leersia perrieri	74.33	6.00e-140	489.00
IUUC-Oba-075451	Oryza barthii	73.67	1.00e-137	482.00
IUUC-Ogl-077259	Oryza glaberrima	40.34	6.00e-62	231.00
IUUC-Ogu-078589	Oryza glumaepatula	73.67	2.00e-138	484.00
IUUC-Oin-079151	Oryza indica	73.43	5.00e-138	483.00
IUUC-Ome-081253	Oryza meridionalis	71.67	5.00e-136	477.00
IUUC-Opu-083336	Oryza punctata	73.91	7.00e-139	486.00
IUUC-Oru-085235	Oryza rufipogon	73.67	3.00e-138	484.00
IUUC-Osa-085611	Oryza sativa	73.67	3.00e-138	484.00
IUUC-Ppe-101243	Prunus persica	82.65	3.00e-122	431.00
IUUC-Smo-109480	Selaginella moellendorffii	63.42	5.00e-115	407.00
IUUC-Sit-109874	Setaria italica	73.86	2.00e-136	478.00
IUUC-Sly-111766	Solanum lycopersicum	78.07	7.00e-158	549.00
IUUC-Stu-112122	Solanum tuberosum	77.16	5.00e-156	543.00
IUUC-Sbi-114220	Sorghum bicolor	75.36	6.00e-138	483.00
IUUC-Tca-121495	Theobroma cacao	81.80	2.00e-163	567.00
IUUC-Tae-124350	Triticum aestivum	65.97	5.00e-71	261.00
IUUC-Tur-126615	Triticum urartu	65.61	5.00e-70	257.00
IUUC-Tbe-128034	Tupaia belangeri	50.82	8.00e-12	63.90
IUUC-Vvi-131064	Vitis vinifera	78.31	3.00e-84	305.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence