iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sit-109994

Ensembl Protein ID

Si016541m

UniProt Accession

K3YQJ8; K3YQJ8_SETIT

Genbank Protein ID

KQL29940.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM003528

Gene Name

LOC101761920; SETIT_016541mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Si016541m.g	Si016541m	Si016541m

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.40e-26	90.5	381	414

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           H d vtc++f   d +++vsGs Dg+++vWD+++
   Q: 381  HRDYVTCVQFnpVDeRYFVSGSIDGKVRVWDVSE 414
           9**********9666****************976 PP

Organism

Setaria italica

Protein Sequence
(Fasta)

MSSLDFDGQE DIFFDVSDDI RSSTCSTARC STSDQLSASW RPEYELWASE PMSVNERRHR 60
FLIGMGLAQP IPTGIAFPQW QGDTLDDCAF RDLEERISSI CSSYQSSFSQ FASAPDSINC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCCAGCC TTGACTTCGA TGGACAGGAA GACATATTCT TTGATGTGTC TGATGATATT 60
AGAAGCTCAA CATGTTCTAC AGCTAGGTGC AGCACGAGTG ACCAATTATC AGCGTCATGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

sita:101761920

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Lpe-051332	Leersia perrieri	51.45	0.00e+00	635.00
IUUC-Oba-075905	Oryza barthii	55.66	4.00e-177	614.00
IUUC-Obr-076137	Oryza brachyantha	55.82	5.00e-177	614.00
IUUC-Ogl-077505	Oryza glaberrima	55.96	1.00e-179	622.00
IUUC-Ogu-078400	Oryza glumaepatula	57.01	0.00e+00	631.00
IUUC-Oin-079305	Oryza indica	56.71	0.00e+00	629.00
IUUC-Ome-081649	Oryza meridionalis	57.40	0.00e+00	648.00
IUUC-Oni-082215	Oryza nivara	56.56	0.00e+00	626.00
IUUC-Opu-083729	Oryza punctata	56.53	0.00e+00	663.00
IUUC-Oru-084343	Oryza rufipogon	56.86	0.00e+00	630.00
IUUC-Sbi-114508	Sorghum bicolor	75.40	0.00e+00	987.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence