iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cja-019279

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ACFV01113896

Gene Name

WDR83

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000005272.2	ENSCJAT00000010206.2	ENSCJAP00000009659.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-33	113.5	107	142
UBD/Beta-Prp	2.70e-51	175.5	15	190

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH+++v+ ++f  + t ++sGs D +i++WD r+ +
   Q: 107  GHAGKVNTVQFnEEaTVILSGSIDSSIRCWDCRSRR 142
           8**********54489***************99866 PP

UBD/Beta-Prp

   S: 42   gkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcle 130
           +k l++l   +++v+av+f+ dg++ +t+++D+t+k+w++  g+ ++t++gh ++vl+ + s ++++l sG+ d+ + +wd+ +gq+++
   Q: 15   QKRLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVR 103
           67788999999999999999999999999999999999999999999999999999999999999999999999999999999999999 PP
   S: 131  etlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl..ktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrt 217
             ++gh g vn+v++++++ ++ sGs D+ +r Wd   ++ + ++tl +   d v s+++++   e+++gs dg+v+ +dl++g+    
   Q: 104  -KFRGHAGKVNTVQFNEEATVILSGSIDSSIRCWDCrsRRPEPVQTLDE-ARDGVSSVKVSD--HEILAGSVDGRVRRYDLRKGQLFSD 188
           .999999999999999999999999999999999996677788999988.999999999999..7899999999999999999987776 PP
   S: 218  ln 219
           + 
   Q: 189  YV 190
           65 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

MAFPEPKPRP PELPQKRLKT LDCGQGAVRA VRFNVDGNYC LTCGSDKTLK LWNPLRGTLL 60
RTYSGHGYEV LDAAGSFDNS SLCSGGGDKA VVLWDVASGQ VVRKFRGHAG KVNTVQFNEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTCATCCTC TGGGCCAAGT CTCACATGAA GCTACTCATC ATTTGCTTCG TGTCCTCTGA 60
GCTCCGAGAG TTGGCAAAGC TGATGAAGGA GCAGTAGACG GCGACCCAAG CACACCACTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0005737--C:cytoplasm
GO:0000398--P:mRNA splicing, via spliceosome

KEGG

cjc:100395664

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002160	Ailuropoda melanoleuca	96.50	0.00e+00	626.00
IUUC-Atr-002647	Amborella trichopoda	49.83	1.00e-89	322.00
IUUC-Aca-004948	Anolis carolinensis	79.94	1.00e-145	508.00
IUUC-Aly-006489	Arabidopsis lyrata	50.84	4.00e-82	297.00
IUUC-Ath-007099	Arabidopsis thaliana	51.18	4.00e-82	297.00
IUUC-Acl-008374	Aspergillus clavatus	37.33	7.00e-49	187.00
IUUC-Afl-008506	Aspergillus flavus	38.33	1.00e-50	193.00
IUUC-Afu-009098	Aspergillus fumigatus	33.84	2.00e-43	169.00
IUUC-Ang-009705	Aspergillus niger	34.84	6.00e-47	181.00
IUUC-Aor-010031	Aspergillus oryzae	38.33	1.00e-50	193.00
IUUC-Ame-011056	Astyanax mexicanus	72.03	3.00e-138	484.00
IUUC-Bgr-012109	Blumeria graminis	42.16	7.00e-57	214.00
IUUC-Bta-012476	Bos taurus	95.56	1.00e-179	622.00
IUUC-Bci-013860	Botrytis cinerea	36.49	2.00e-46	179.00
IUUC-Bdi-014565	Brachypodium distachyon	49.49	1.00e-86	312.00
IUUC-Bol-016204	Brassica oleracea	50.85	9.00e-82	296.00
IUUC-Bra-018093	Brassica rapa	50.85	2.00e-81	295.00
IUUC-Cel-018500	Caenorhabditis elegans	48.46	6.00e-85	306.00
IUUC-Cfa-020516	Canis familiaris	96.19	0.00e+00	626.00
IUUC-Cpo-021427	Cavia porcellus	93.02	2.00e-166	578.00
IUUC-Cre-022775	Chlamydomonas reinhardtii	46.15	1.00e-74	273.00
IUUC-Csa-023449	Chlorocebus sabaeus	97.78	4.00e-172	596.00
IUUC-Cin-025637	Ciona intestinalis	57.91	4.00e-107	380.00
IUUC-Cgl-026458	Colletotrichum gloeosporioides	37.85	8.00e-51	193.00
IUUC-Cne-026994	Cryptococcus neoformans	36.16	4.00e-50	191.00
IUUC-Dre-028239	Danio rerio	73.86	1.00e-131	462.00
IUUC-Dno-029408	Dasypus novemcinctus	93.65	2.00e-177	614.00
IUUC-Dor-030684	Dipodomys ordii	95.61	2.00e-114	405.00
IUUC-Dse-031344	Dothistroma septosporum	45.80	2.00e-53	202.00
IUUC-Dme-031634	Drosophila melanogaster	47.92	5.00e-77	280.00
IUUC-Ete-033126	Echinops telfairi	86.98	3.00e-160	557.00
IUUC-Eca-034356	Equus caballus	88.57	6.00e-159	553.00
IUUC-Eeu-035196	Erinaceus europaeus	94.08	5.00e-80	290.00
IUUC-Fca-036231	Felis catus	95.87	8.00e-180	622.00
IUUC-Fox-038076	Fusarium oxysporum	36.91	4.00e-53	201.00
IUUC-Fso-038093	Fusarium solani	35.86	3.00e-45	175.00
IUUC-Gmo-039056	Gadus morhua	71.70	1.00e-131	462.00
IUUC-Ggr-039981	Gaeumannomyces graminis	33.93	1.00e-43	170.00
IUUC-Gga-041042	Gallus gallus	77.49	5.00e-149	520.00
IUUC-Gac-042638	Gasterosteus aculeatus	72.88	3.00e-135	474.00
IUUC-Gma-042689	Glycine max	51.02	2.00e-89	322.00
IUUC-Ggo-044720	Gorilla gorilla	98.41	3.00e-173	600.00
IUUC-Hsa-046056	Homo sapiens	99.05	6.00e-174	602.00
IUUC-Hvu-047675	Hordeum vulgare	46.91	3.00e-84	305.00
IUUC-Itr-048733	Ictidomys tridecemlineatus	94.08	8.00e-172	595.00
IUUC-Lch-050634	Latimeria chalumnae	78.29	5.00e-132	463.00
IUUC-Lpe-051470	Leersia perrieri	49.49	3.00e-86	311.00
IUUC-Loc-052452	Lepisosteus oculatus	77.23	1.00e-134	472.00
IUUC-Lma-053235	Leptosphaeria maculans	40.95	6.00e-27	114.00
IUUC-Laf-054315	Loxodonta africana	95.56	1.00e-169	588.00
IUUC-Mcc-054923	Macaca mulatta	97.78	2.00e-172	597.00
IUUC-Mor-056936	Magnaporthe oryzae	36.82	2.00e-45	176.00
IUUC-Mtr-058595	Medicago truncatula	51.89	4.00e-89	320.00
IUUC-Mla-058902	Melampsora laricipopulina	39.50	8.00e-60	223.00
IUUC-Mvi-060471	Microbotryum violaceum	42.62	3.00e-71	261.00
IUUC-Mmr-061665	Microcebus murinus	95.56	1.00e-179	621.00
IUUC-Mdo-062750	Monodelphis domestica	82.33	3.00e-134	470.00
IUUC-Mmu-063750	Mus musculus	93.65	8.00e-177	612.00
IUUC-Mac-065441	Musa acuminata	50.68	5.00e-89	320.00
IUUC-Mpu-066863	Mustela putorius furo	95.56	1.00e-179	621.00
IUUC-Mlu-067645	Myotis lucifugus	94.60	2.00e-177	614.00
IUUC-Nfi-068549	Neosartorya fischeri	36.69	1.00e-47	184.00
IUUC-Ncr-068816	Neurospora crassa	34.59	4.00e-41	162.00
IUUC-Nle-069457	Nomascus leucogenys	98.73	2.00e-173	601.00
IUUC-Opr-070874	Ochotona princeps	93.84	6.00e-78	283.00
IUUC-Ont-071674	Oreochromis niloticus	72.76	2.00e-121	428.00
IUUC-Oan-073391	Ornithorhynchus anatinus	79.37	3.00e-151	527.00
IUUC-Ocu-074186	Oryctolagus cuniculus	93.65	1.00e-170	591.00
IUUC-Oba-075414	Oryza barthii	50.90	5.00e-84	304.00
IUUC-Obr-076739	Oryza brachyantha	48.63	9.00e-85	306.00
IUUC-Ogl-076962	Oryza glaberrima	49.49	7.00e-86	310.00
IUUC-Ogu-078831	Oryza glumaepatula	49.49	5.00e-86	310.00
IUUC-Oin-079985	Oryza indica	49.15	7.00e-86	310.00
IUUC-Ome-081333	Oryza meridionalis	48.89	8.00e-78	283.00
IUUC-Oni-082558	Oryza nivara	49.15	7.00e-86	310.00
IUUC-Opu-084091	Oryza punctata	49.83	4.00e-87	314.00
IUUC-Oru-085253	Oryza rufipogon	49.45	2.00e-80	291.00
IUUC-Osa-086077	Oryza sativa	49.15	7.00e-86	310.00
IUUC-Ola-086946	Oryzias latipes	71.97	8.00e-136	476.00
IUUC-Olu-087604	Ostreococcus lucimarinus	40.32	1.00e-53	203.00
IUUC-Oga-088681	Otolemur garnettii	94.23	8.00e-175	605.00
IUUC-Oar-089913	Ovis aries	94.60	8.00e-177	612.00
IUUC-Ptr-091343	Pan troglodytes	98.41	7.00e-172	595.00
IUUC-Pan-092078	Papio anubis	97.78	4.00e-172	596.00
IUUC-Psi-093190	Pelodiscus sinensis	80.13	8.00e-152	529.00
IUUC-Pno-095078	Phaeosphaeria nodorum	39.49	1.00e-53	203.00
IUUC-Ppa-095777	Physcomitrella patens	50.51	2.00e-89	322.00
IUUC-Pfo-097153	Poecilia formosa	74.26	6.00e-129	453.00
IUUC-Pab-098307	Pongo abelii	97.47	3.00e-170	590.00
IUUC-Pop-099315	Populus trichocarpa	52.20	1.00e-83	302.00
IUUC-Pca-100538	Procavia capensis	94.80	2.00e-149	521.00
IUUC-Ppe-101632	Prunus persica	49.49	7.00e-89	320.00
IUUC-Pva-102484	Pteropus vampyrus	96.83	0.00e+00	626.00
IUUC-Pgr-103495	Puccinia graminis	39.19	3.00e-62	231.00
IUUC-Ptt-103975	Puccinia triticina	38.83	8.00e-61	226.00
IUUC-Pte-104354	Pyrenophora teres	37.32	5.00e-42	164.00
IUUC-Pyt-104692	Pyrenophora triticirepentis	38.04	6.00e-42	164.00
IUUC-Rno-105655	Rattus norvegicus	93.02	1.00e-175	608.00
IUUC-Sha-107130	Sarcophilus harrisii	83.12	6.00e-112	396.00
IUUC-Sja-107933	Schizosaccharomyces japonicus	39.57	1.00e-57	216.00
IUUC-Spo-108131	Schizosaccharomyces pombe	41.26	4.00e-58	218.00
IUUC-Ssl-108405	Sclerotinia sclerotiorum	36.49	9.00e-47	180.00
IUUC-Smo-108996	Selaginella moellendorffii	48.46	3.00e-80	291.00
IUUC-Sit-110508	Setaria italica	50.17	4.00e-87	314.00
IUUC-Sly-111093	Solanum lycopersicum	48.98	2.00e-80	291.00
IUUC-Stu-112380	Solanum tuberosum	48.98	2.00e-80	292.00
IUUC-Sar-113127	Sorex araneus	88.28	6.00e-72	263.00
IUUC-Sbi-114461	Sorghum bicolor	49.15	2.00e-85	308.00
IUUC-Sre-115020	Sporisorium reilianum	41.38	8.00e-42	165.00
IUUC-Ssc-115632	Sus scrofa	96.14	3.00e-179	620.00
IUUC-Tru-118039	Takifugu rubripes	70.59	8.00e-127	446.00
IUUC-Tsy-119239	Tarsius syrichta	98.22	4.00e-96	344.00
IUUC-Tni-120097	Tetraodon nigroviridis	68.34	6.00e-124	436.00
IUUC-Tca-121695	Theobroma cacao	52.04	8.00e-92	330.00
IUUC-Tre-122182	Trichoderma reesei	36.98	3.00e-49	189.00
IUUC-Tvi-122429	Trichoderma virens	36.88	2.00e-52	199.00
IUUC-Tae-125136	Triticum aestivum	50.85	1.00e-88	319.00
IUUC-Tur-126216	Triticum urartu	50.85	5.00e-89	320.00
IUUC-Tme-127030	Tuber melanosporum	42.65	1.00e-61	229.00
IUUC-Tbe-127686	Tupaia belangeri	92.59	3.00e-101	361.00
IUUC-Ttr-128770	Tursiops truncatus	94.92	3.00e-179	620.00
IUUC-Uma-129446	Ustilago maydis	35.06	5.00e-37	149.00
IUUC-Vda-129680	Verticillium dahliae	39.34	5.00e-42	164.00
IUUC-Vvi-131292	Vitis vinifera	52.22	1.00e-90	326.00
IUUC-Xtr-132204	Xenopus tropicalis	75.80	3.00e-146	510.00
IUUC-Xma-133727	Xiphophorus maculatus	73.08	4.00e-129	453.00
IUUC-Zma-135908	Zea mays	49.15	4.00e-80	291.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence