iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131329

UUCD1 version

UUC-ViV-00789

Ensembl Protein ID

VIT_03s0063g00180.t01

UniProt Accession

F6HQ94; F6HQ94_VITVI

Genbank Protein ID

CCB56851.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

FN596006

Gene Name

VIT_03s0063g00180

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_03s0063g00180	VIT_03s0063g00180.t01	VIT_03s0063g00180.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.70e-34	117.2	13	85

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           ++p +f+CpIslelM+dPv++++G+tydr+sIe w+ +g++tcPvtr++lt+ +l+Pn+tlrrliq+wc +n+
   Q: 13   QIPYHFRCPISLELMCDPVTVSTGQTYDRASIEYWVGTGNTTCPVTRSSLTDFTLIPNHTLRRLIQDWCVANR 85
           5899*****************************************************************9986 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MPGSLEPLDV GVQIPYHFRC PISLELMCDP VTVSTGQTYD RASIEYWVGT GNTTCPVTRS 60
SLTDFTLIPN HTLRRLIQDW CVANRSFGVE RIPTPKQPAD PASVRSLQTQ VSSQSNPSHT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCAGATATAG TATTGCTCGT CCTATTATAG AGAGAAAGAA AAAAATGCCT GGGAGTTTAG 60
AGCCATTGGA TGTGGGTGTT CAGATCCCAT ACCACTTCAG GTGTCCGATC TCGCTCGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

vvi:100264205

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000645	Aegilops tauschii	47.84	1.00e-80	292.00
IUUC-Atr-002952	Amborella trichopoda	58.35	6.00e-107	380.00
IUUC-Aly-005606	Arabidopsis lyrata	65.17	8.00e-145	505.00
IUUC-Ath-006933	Arabidopsis thaliana	65.33	4.00e-130	456.00
IUUC-Bdi-014994	Brachypodium distachyon	64.97	1.00e-50	193.00
IUUC-Bol-015328	Brassica oleracea	66.90	2.00e-141	494.00
IUUC-Bra-017765	Brassica rapa	66.51	2.00e-144	504.00
IUUC-Gma-043153	Glycine max	74.64	1.00e-171	594.00
IUUC-Hvu-047378	Hordeum vulgare	48.56	3.00e-82	297.00
IUUC-Lpe-050781	Leersia perrieri	61.49	2.00e-49	188.00
IUUC-Mtr-058307	Medicago truncatula	73.59	6.00e-159	552.00
IUUC-Mac-065232	Musa acuminata	56.33	1.00e-71	262.00
IUUC-Oba-075168	Oryza barthii	67.59	8.00e-47	178.00
IUUC-Ogl-077566	Oryza glaberrima	61.96	3.00e-50	191.00
IUUC-Ogu-078818	Oryza glumaepatula	61.96	6.00e-50	189.00
IUUC-Oin-079962	Oryza indica	63.80	1.00e-47	186.00
IUUC-Oni-082172	Oryza nivara	61.96	4.00e-50	191.00
IUUC-Opu-083930	Oryza punctata	60.61	1.00e-51	195.00
IUUC-Oru-084509	Oryza rufipogon	61.96	4.00e-50	191.00
IUUC-Osa-085902	Oryza sativa	61.96	4.00e-50	191.00
IUUC-Pop-100012	Populus trichocarpa	77.11	9.00e-172	595.00
IUUC-Ppe-101571	Prunus persica	77.40	3.00e-159	553.00
IUUC-Smo-108904	Selaginella moellendorffii	48.05	1.00e-74	272.00
IUUC-Sit-110186	Setaria italica	62.18	5.00e-49	187.00
IUUC-Sly-111810	Solanum lycopersicum	76.39	4.00e-174	603.00
IUUC-Stu-112274	Solanum tuberosum	77.59	1.00e-176	611.00
IUUC-Sbi-114366	Sorghum bicolor	60.98	6.00e-52	197.00
IUUC-Tca-121177	Theobroma cacao	75.72	0.00e+00	639.00
IUUC-Tae-125035	Triticum aestivum	48.08	3.00e-81	294.00
IUUC-Tur-126112	Triticum urartu	47.60	2.00e-80	291.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence