iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114456

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G187800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g023630	Sb04g023630.1	Sb04g023630.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.20e-07	31.2	152	194

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C +Cl +f+dg  +++lp C H+fh +C+  w       + + +CPlCr
   Q: 152  CTVCLGEFQDGelLRLLPkCAHAFHVQCIDTW------LRAHVSCPLCR 194
           9*******99888888999*************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGALPQPDPK NTSSCDDGQG PDPSCPPDDV PASPLPYPLP PPPPPPSPAS HGRSTFVTAL 60
IIAVPVLAFL ALCLSILIFV RRRRLRREAL LEAAALAPAA PGTFPDDGDG GEGEVVHHAW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGAGCCAAC CGAAAACACC CGCCTCGCCC TCCGTCAGCC ACTACTCAGT CCAGACTCCA 60
GACTGCAGTC TGCGGACACA AAAGTCACGC GTCGTCGTCA TGATCGCGAC GCCATCGCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_04g023630

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Dre-027786	Danio rerio	46.48	2.00e-15	76.30
IUUC-Fca-035572	Felis catus	41.56	1.00e-14	73.90
IUUC-Hvu-047104	Hordeum vulgare	50.00	8.00e-48	183.00
IUUC-Lpe-051373	Leersia perrieri	47.73	2.00e-41	161.00
IUUC-Obr-076146	Oryza brachyantha	57.07	5.00e-43	167.00
IUUC-Opu-083936	Oryza punctata	49.78	2.00e-42	165.00
IUUC-Sit-110722	Setaria italica	61.69	1.00e-54	205.00
IUUC-Tae-124381	Triticum aestivum	56.41	1.00e-44	172.00
IUUC-Tur-126758	Triticum urartu	55.09	6.00e-34	136.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence