iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-007183

UUCD1 version

UUC-ArT-00376

Ensembl Protein ID

AT3G48070.1

UniProt Accession

Q9SU70; Q9SU70_ARATH

Genbank Protein ID

AAM61495.1; AAY57618.1; ABG48471.1; AEE78363.1; BAD93892.1; CAB41132.1

Protein Name

At3g48070; Putative uncharacterized protein; Putative uncharacterized protein At3g48070; Putative uncharacterized protein T17F15.60; RING finger family protein; RING/U-box superfamily protein

Genbank Nucleotide ID

AY084934; DQ059132; BT026115; CP002686; AK221778; AL049658

Gene Name

T17F15.60; At3g48070

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT3G48070	AT3G48070.1	AT3G48070.1
AT3G48070	AT3G48070.2	AT3G48070.2

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/RING	RING	16339806

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MISDSITNAS ATSAPTARDF GKKKRTNRSA KLKQSKLGLR REQWLSQVAM INKGDKEEME 60
SNRRIGSEKP DQRDLPRPVE NLDEDNNGTH RHESFIESLS NSPNSILSGM NSIPNFSSSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACAGACACA ACAAACAAAG CAAAAAAAAA TAAAAAATCG CACGTTTCTT CTTCTTCTTC 60
TCTCTCGCAA CAAATCTGTA TTAGGGTTTT TGAGAAATCT TCATTTCGTG ATTTTGAAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000955	Aegilops tauschii	52.50	5.00e-32	130.00
IUUC-Atr-002759	Amborella trichopoda	48.65	7.00e-33	133.00
IUUC-Bdi-014224	Brachypodium distachyon	47.86	7.00e-31	127.00
IUUC-Bol-016480	Brassica oleracea	78.57	2.00e-119	421.00
IUUC-Bra-017159	Brassica rapa	72.62	4.00e-111	393.00
IUUC-Cre-022872	Chlamydomonas reinhardtii	50.00	3.00e-11	62.40
IUUC-Hvu-047299	Hordeum vulgare	48.89	9.00e-31	126.00
IUUC-Lpe-050994	Leersia perrieri	49.29	2.00e-31	128.00
IUUC-Ogl-077934	Oryza glaberrima	41.45	1.00e-28	119.00
IUUC-Oin-079502	Oryza indica	41.45	1.00e-28	119.00
IUUC-Ppa-095589	Physcomitrella patens	41.32	6.00e-24	104.00
IUUC-Sit-109971	Setaria italica	50.00	6.00e-31	127.00
IUUC-Sbi-113775	Sorghum bicolor	52.48	4.00e-26	111.00
IUUC-Tca-121833	Theobroma cacao	57.50	8.00e-45	173.00
IUUC-Tae-123382	Triticum aestivum	51.67	8.00e-31	127.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence