iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095792

Ensembl Protein ID

PP1S312_42V6.1

UniProt Accession

A9TT81; A9TT81_PHYPA

Genbank Protein ID

EDQ53358.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545201

Gene Name

PHYPADRAFT_96825

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S312_42V6	PP1S312_42V6.1	PP1S312_42V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-18	66.0	621	658

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvllk 37
           gHt+++ +l++ +++ll+s+s D+t+++W +++  +l+
   Q: 621  GHTGDILDLSWsQSKLLLSSSMDKTVRLWHISEEECLR 658
           8**********744***************988887775 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MGGKIGSEDE FHETLEDITS ASSSDAEEGG RRSMRARVAG VAPATSHERP PIWTPSSFHS 60
KFSVWKDDPS SITDRRQRLF QTWGIKNLRE ESNTGSATSL ATKRLLPAEN IRGDQQVVKV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTGGCA AAATTGGATC GGAGGATGAG TTTCACGAGA CTTTGGAAGA TATCACGTCA 60
GCATCAAGTT CAGACGCTGA GGAGGGTGGT CGAAGGTCCA TGAGAGCACG TGTTGCCGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011044--Quino_amine_DH_bsu
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

ppp:PHYPADRAFT_96825

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-015849	Brassica oleracea	40.92	5.00e-109	387.00
IUUC-Bra-017269	Brassica rapa	40.94	2.00e-108	386.00
IUUC-Hvu-047755	Hordeum vulgare	40.17	3.00e-101	362.00
IUUC-Lpe-051282	Leersia perrieri	41.19	1.00e-102	367.00
IUUC-Mtr-058330	Medicago truncatula	40.71	1.00e-105	377.00
IUUC-Mac-064884	Musa acuminata	41.74	2.00e-111	396.00
IUUC-Oba-075809	Oryza barthii	40.73	1.00e-103	370.00
IUUC-Ogl-077572	Oryza glaberrima	39.27	1.00e-94	340.00
IUUC-Ogu-077983	Oryza glumaepatula	40.92	6.00e-104	370.00
IUUC-Oin-079380	Oryza indica	41.09	1.00e-104	373.00
IUUC-Olo-080307	Oryza longistaminata	37.62	1.00e-86	313.00
IUUC-Ome-081629	Oryza meridionalis	40.59	5.00e-104	371.00
IUUC-Opu-083402	Oryza punctata	39.45	8.00e-102	363.00
IUUC-Oru-085107	Oryza rufipogon	38.92	1.00e-100	360.00
IUUC-Osa-086029	Oryza sativa	39.27	9.00e-95	340.00
IUUC-Smo-108748	Selaginella moellendorffii	42.09	2.00e-107	382.00
IUUC-Sit-109842	Setaria italica	39.76	9.00e-97	347.00
IUUC-Sly-111804	Solanum lycopersicum	41.30	3.00e-105	375.00
IUUC-Stu-111949	Solanum tuberosum	41.71	2.00e-109	389.00
IUUC-Vvi-130908	Vitis vinifera	44.03	1.00e-105	377.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence