iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.8__1082__AT5G51980.1	fgenesh2_kg.8__1082__AT5G51980.1	fgenesh2_kg.8__1082__AT5G51980.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.10e-27	92.7	152	189

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH+  v+++a+ s+ + l +Gs D t++vWD  +g ++
   Q: 152  GHEKLVSGIALpSGsDKLYTGSKDETLRVWDCASGQCT 189
           899********966799***************999986 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MDFDLNGGNK RVFNRLGGGG GGGGSTRTMA PTDTRQKVCF HWRAGRCNRS PCPYLHRELP 60
GPGPGQGQGP GYTNKRVAEE SGFAGPSHRR GPGFNGNSNS SWGRFGGNRT VTKTEKVCNF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTTCTCTT CATTATTATT ACTTCACCAC ATTCACAACA ATCCCAAATT TTTCTTTCTT 60
ATACTTCCAT ATTTTGATTA CTACTTTTCA GAGATTGTTT TCGGTAATTA AAATTTTCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0853--WD repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR000571--Znf_CCCH

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS50103--ZF_C3H1

Pfam

PF00400--WD40
PF00642--zf-CCCH

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40
SM00356--ZnF_C3H1

Gene Ontology

GO:0046872--F:metal ion binding

KEGG

aly:ARALYDRAFT_495266

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000399	Aegilops tauschii	42.60	4.00e-71	260.00
IUUC-Atr-002831	Amborella trichopoda	56.46	8.00e-147	512.00
IUUC-Ath-007001	Arabidopsis thaliana	96.82	0.00e+00	843.00
IUUC-Bdi-014857	Brachypodium distachyon	58.33	9.00e-150	522.00
IUUC-Bol-016382	Brassica oleracea	81.55	0.00e+00	715.00
IUUC-Bra-016755	Brassica rapa	86.65	0.00e+00	738.00
IUUC-Gma-042894	Glycine max	63.72	1.00e-159	555.00
IUUC-Hvu-047824	Hordeum vulgare	57.89	3.00e-117	414.00
IUUC-Lpe-051596	Leersia perrieri	52.98	5.00e-125	439.00
IUUC-Mtr-058068	Medicago truncatula	60.88	5.00e-152	530.00
IUUC-Mac-065071	Musa acuminata	62.21	4.00e-157	546.00
IUUC-Oba-075769	Oryza barthii	52.26	1.00e-122	432.00
IUUC-Obr-076011	Oryza brachyantha	60.22	2.00e-151	528.00
IUUC-Ogl-077192	Oryza glaberrima	52.02	1.00e-77	281.00
IUUC-Ogu-078248	Oryza glumaepatula	52.56	1.00e-125	442.00
IUUC-Oin-079981	Oryza indica	58.80	7.00e-151	526.00
IUUC-Olo-080571	Oryza longistaminata	51.87	1.00e-114	405.00
IUUC-Ome-081598	Oryza meridionalis	51.89	2.00e-124	437.00
IUUC-Oni-082711	Oryza nivara	52.12	8.00e-125	439.00
IUUC-Opu-083451	Oryza punctata	56.93	8.00e-147	512.00
IUUC-Oru-085129	Oryza rufipogon	52.49	3.00e-122	430.00
IUUC-Ppa-096012	Physcomitrella patens	53.45	7.00e-111	393.00
IUUC-Pop-099994	Populus trichocarpa	66.22	4.00e-168	583.00
IUUC-Ppe-101609	Prunus persica	71.07	0.00e+00	640.00
IUUC-Smo-109306	Selaginella moellendorffii	54.43	3.00e-98	350.00
IUUC-Sit-109731	Setaria italica	57.24	1.00e-142	498.00
IUUC-Sly-111514	Solanum lycopersicum	62.64	4.00e-156	543.00
IUUC-Stu-112646	Solanum tuberosum	63.51	1.00e-159	555.00
IUUC-Sbi-114748	Sorghum bicolor	58.09	1.00e-145	509.00
IUUC-Tca-121658	Theobroma cacao	66.81	5.00e-173	600.00
IUUC-Tae-125577	Triticum aestivum	59.82	2.00e-152	531.00
IUUC-Tur-126095	Triticum urartu	53.75	2.00e-87	315.00
IUUC-Vvi-131444	Vitis vinifera	65.34	3.00e-174	603.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence