iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Hvu-047824

Ensembl Protein ID

MLOC_68293.1

UniProt Accession

F2DFR6; F2DFR6_HORVV

Genbank Protein ID

BAJ93937.1

Protein Name

Predicted protein

Genbank Nucleotide ID

AK362733

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MLOC_68293	MLOC_68293.4	MLOC_68293.4
MLOC_68293	MLOC_68293.3	MLOC_68293.3
MLOC_68293	MLOC_68293.1	MLOC_68293.1
MLOC_68293	MLOC_68293.2	MLOC_68293.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.10e-22	77.3	147	183

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtgvl 35
           gH+  vt++a+   s + l sGs Dgt+++WD  tg +
   Q: 147  GHEKVVTGIALpagS-DKLYSGSKDGTVRLWDCQTGQC 183
           8**********9754.899***************9988 PP

Organism

Hordeum vulgare

Protein Sequence
(Fasta)

MDFEADGRFG NKRVHNRLGP APGAASSSSS TKVCIHWRAG RCNRFPCPFL HSELPEAATT 60
KRPNQRDGPG GHVWRNPNSG GGGRGGGGGY NKWGRGPGGA DGGVRHKVPD RPCKFFLAGD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGCCACGTT GTATTAACCG GAGCCGGCCC AACCTTCCGC CCGCGAGCTA AACCCGACCA 60
AGGGGAAAGC AGGGCCACCG TAAGCGCCTC CTCTCCCCGC TCCGATCCGG ATCTCCCCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0853--WD repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR000571--Znf_CCCH

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS50103--ZF_C3H1

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40
SM00356--ZnF_C3H1

Gene Ontology

GO:0046872--F:metal ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000399	Aegilops tauschii	56.13	6.00e-70	256.00
IUUC-Atr-002831	Amborella trichopoda	55.15	3.00e-108	383.00
IUUC-Aly-005699	Arabidopsis lyrata	58.42	8.00e-118	415.00
IUUC-Ath-007001	Arabidopsis thaliana	58.36	1.00e-117	414.00
IUUC-Bdi-014857	Brachypodium distachyon	92.39	6.00e-178	615.00
IUUC-Bol-015897	Brassica oleracea	58.15	2.00e-115	407.00
IUUC-Bra-017351	Brassica rapa	58.06	7.00e-117	412.00
IUUC-Cre-022837	Chlamydomonas reinhardtii	35.64	9.00e-24	103.00
IUUC-Gma-042894	Glycine max	57.66	3.00e-109	387.00
IUUC-Lpe-051596	Leersia perrieri	74.65	2.00e-130	457.00
IUUC-Mtr-058068	Medicago truncatula	56.52	2.00e-104	371.00
IUUC-Mac-065071	Musa acuminata	66.95	3.00e-133	466.00
IUUC-Oba-075769	Oryza barthii	74.02	8.00e-138	482.00
IUUC-Obr-076011	Oryza brachyantha	87.89	2.00e-168	583.00
IUUC-Ogl-077192	Oryza glaberrima	55.69	4.00e-55	206.00
IUUC-Ogu-078248	Oryza glumaepatula	76.26	4.00e-139	486.00
IUUC-Oin-079981	Oryza indica	83.80	6.00e-166	575.00
IUUC-Olo-080571	Oryza longistaminata	73.46	4.00e-136	476.00
IUUC-Ome-081598	Oryza meridionalis	72.91	4.00e-136	476.00
IUUC-Oni-082711	Oryza nivara	73.18	1.00e-136	478.00
IUUC-Opu-083451	Oryza punctata	81.84	1.00e-161	561.00
IUUC-Oru-085129	Oryza rufipogon	73.18	5.00e-137	479.00
IUUC-Osa-085619	Oryza sativa	83.19	3.00e-154	536.00
IUUC-Ppa-096012	Physcomitrella patens	55.60	2.00e-82	298.00
IUUC-Pop-099994	Populus trichocarpa	61.03	2.00e-114	404.00
IUUC-Ppe-101609	Prunus persica	61.77	1.00e-121	428.00
IUUC-Smo-108900	Selaginella moellendorffii	47.43	9.00e-73	266.00
IUUC-Sit-109731	Setaria italica	79.78	1.00e-152	531.00
IUUC-Sly-111514	Solanum lycopersicum	56.94	3.00e-107	380.00
IUUC-Stu-112646	Solanum tuberosum	56.51	2.00e-111	394.00
IUUC-Sbi-114748	Sorghum bicolor	82.02	2.00e-161	560.00
IUUC-Tca-121658	Theobroma cacao	59.83	3.00e-110	390.00
IUUC-Tae-125489	Triticum aestivum	98.59	0.00e+00	651.00
IUUC-Tur-126095	Triticum urartu	97.30	2.00e-152	531.00
IUUC-Vvi-131444	Vitis vinifera	58.33	1.00e-118	418.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence