iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-110835

Ensembl Protein ID

Solyc08g076830.1.1

UniProt Accession

K4CN43; K4CN43_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc08g076830.1	Solyc08g076830.1.1	Solyc08g076830.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.90e-07	32.2	144	186

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl++f  ++ +++lp C H+fh +C+  w       + + +CPlCr
   Q: 144  CSVCLSEFldDENLRLLPkCSHAFHVTCIDTW------LKSHSNCPLCR 186
           ********98555*******************......**********8 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MVSVNSSRTW APPHMSTRDC SQESCSLYCP QWCYIIFPPP PPFDFPADDN DSGPNFSPLV 60
IGIIGILTSA FLLVSYYVIM SKCCGHRIGL SRENHLNDSE LEENDPSIHE AWNVNTTGLD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGTCTG TAAACAGTTC AAGAACTTGG GCACCACCAC ATATGAGCAC AAGGGATTGT 60
TCCCAAGAAT CCTGCAGTTT ATACTGCCCA CAATGGTGTT ATATAATCTT CCCACCTCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sly:101260465

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002971	Amborella trichopoda	44.84	9.00e-64	236.00
IUUC-Ath-006705	Arabidopsis thaliana	41.71	1.00e-54	206.00
IUUC-Bdi-014591	Brachypodium distachyon	55.34	5.00e-44	171.00
IUUC-Gma-042838	Glycine max	50.32	2.00e-60	225.00
IUUC-Hvu-047701	Hordeum vulgare	56.12	2.00e-50	191.00
IUUC-Lpe-051459	Leersia perrieri	55.56	8.00e-52	196.00
IUUC-Mtr-058411	Medicago truncatula	48.11	9.00e-64	236.00
IUUC-Mac-065580	Musa acuminata	43.02	3.00e-61	228.00
IUUC-Oba-075508	Oryza barthii	56.94	3.00e-53	201.00
IUUC-Obr-076311	Oryza brachyantha	51.63	2.00e-52	199.00
IUUC-Ogl-077644	Oryza glaberrima	53.64	5.00e-48	184.00
IUUC-Ogu-078989	Oryza glumaepatula	53.18	1.00e-47	183.00
IUUC-Oin-079716	Oryza indica	53.64	6.00e-48	184.00
IUUC-Olo-081066	Oryza longistaminata	53.39	9.00e-52	196.00
IUUC-Ome-081279	Oryza meridionalis	51.82	8.00e-48	183.00
IUUC-Oni-082586	Oryza nivara	55.29	2.00e-51	195.00
IUUC-Opu-083498	Oryza punctata	55.07	4.00e-53	201.00
IUUC-Ppa-095182	Physcomitrella patens	47.24	1.00e-28	120.00
IUUC-Pop-099246	Populus trichocarpa	49.58	2.00e-75	275.00
IUUC-Ppe-101720	Prunus persica	48.84	2.00e-69	255.00
IUUC-Sit-109894	Setaria italica	56.72	1.00e-51	196.00
IUUC-Stu-112220	Solanum tuberosum	93.06	3.00e-162	563.00
IUUC-Sbi-114789	Sorghum bicolor	57.51	1.00e-49	189.00
IUUC-Tca-121189	Theobroma cacao	50.13	9.00e-83	299.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence