iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111406

Ensembl Protein ID

Solyc02g085140.2.1

UniProt Accession

K4BB28; K4BB28_SOLLC

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc02g085140.2	Solyc02g085140.2.1	Solyc02g085140.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.00e-27	94.5	224	296

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p+ef+Cp+s  lM dPvv++sG+ty+r  Iekw+a+g+ tcP+t+++l + + +Pn+++++li++w +++++
   Q: 224  LPDEFKCPLSSRLMYDPVVIASGQTYERFWIEKWFAQGNDTCPKTKRKLVHLSSTPNNSMKDLISRWTAAHGV 296
           79*******************************************************************9986 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MLLPAIEEAR PGSNPGIQVL CQINRALDKA KDILQHCSES SKLYLALTGN VILSRCNKSK 60
KLLEQSLSCV QNMVPVMLAT QISQLVADLG AGIFSLDPSE EEARKVLSKL LHQYTSTTHS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTATCGAGTC CCATTGTGCT ATTTATGTTT TGCCATACAA TCTTTTCTAT GACTAAATAT 60
ATCCTACATT GGATGATTAC AGGTGCATCG TCTAATGTGC ATGGAACTAA TTAAATTTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000166	Aegilops tauschii	35.68	6.00e-108	384.00
IUUC-Ath-006905	Arabidopsis thaliana	32.74	3.00e-94	338.00
IUUC-Bdi-014593	Brachypodium distachyon	37.21	2.00e-109	389.00
IUUC-Bol-016241	Brassica oleracea	35.82	1.00e-96	347.00
IUUC-Bra-018043	Brassica rapa	36.17	1.00e-108	386.00
IUUC-Gma-044030	Glycine max	43.47	1.00e-143	502.00
IUUC-Hvu-047756	Hordeum vulgare	35.27	3.00e-104	372.00
IUUC-Lpe-050784	Leersia perrieri	35.75	2.00e-96	346.00
IUUC-Mtr-058215	Medicago truncatula	43.52	3.00e-134	471.00
IUUC-Mac-064841	Musa acuminata	36.38	9.00e-114	404.00
IUUC-Oba-075842	Oryza barthii	35.50	9.00e-100	357.00
IUUC-Obr-076217	Oryza brachyantha	36.09	5.00e-99	354.00
IUUC-Ogl-077921	Oryza glaberrima	35.50	8.00e-100	357.00
IUUC-Ogu-078199	Oryza glumaepatula	35.89	3.00e-99	355.00
IUUC-Oin-079116	Oryza indica	35.80	4.00e-100	358.00
IUUC-Olo-080352	Oryza longistaminata	35.27	2.00e-94	339.00
IUUC-Ome-081110	Oryza meridionalis	35.65	6.00e-100	357.00
IUUC-Oni-082415	Oryza nivara	35.80	1.00e-99	357.00
IUUC-Opu-083658	Oryza punctata	35.21	2.00e-97	349.00
IUUC-Oru-084974	Oryza rufipogon	35.50	3.00e-99	355.00
IUUC-Osa-086052	Oryza sativa	35.65	8.00e-100	357.00
IUUC-Pop-099657	Populus trichocarpa	47.05	9.00e-167	579.00
IUUC-Ppe-101895	Prunus persica	46.12	1.00e-112	399.00
IUUC-Sit-110432	Setaria italica	35.68	2.00e-95	342.00
IUUC-Stu-112174	Solanum tuberosum	95.15	0.00e+00	1283.00
IUUC-Sbi-113885	Sorghum bicolor	36.23	1.00e-89	323.00
IUUC-Tca-121394	Theobroma cacao	46.34	3.00e-159	554.00
IUUC-Tae-123767	Triticum aestivum	35.54	1.00e-107	383.00
IUUC-Tur-126678	Triticum urartu	35.19	2.00e-93	337.00
IUUC-Vvi-130887	Vitis vinifera	46.91	8.00e-157	546.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence