iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095912

Ensembl Protein ID

PP1S199_83V6.1

UniProt Accession

A9TBL8; A9TBL8_PHYPA

Genbank Protein ID

EDQ59174.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545088

Gene Name

PHYPADRAFT_193513

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S199_83V6	PP1S199_83V6.1	PP1S199_83V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.20e-07	30.8	438	469

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvW.D 29
           H + vt+la    s+ +++s s Dgt+++W D
   Q: 438  HDGTVTDLAVpsfSTFRVASVSQDGTMRIWgD 469
           889999998867654569************55 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MGATGPSGGF DIHNFFNKQP PSPYPPPQYP SHTPYPPSQF PQSPGCFPTN PGSFPSMPPQ 60
NFQYSAQQQQ GQPHVFHPYI HYQQEHGVRP SNYNTAPYNQ QQQQQQQQQQ QQQGQFPSPG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTAAGTAAGT GAGTATCGCA TCCTCTCCCT CACCCGCCCG CCCACCATCA AGGCAGCGCC 60
AGGCAGATCC CTTTTCTCGT TGCGCGTGTC ATGTTGCGCT TGTTGCTTCG ACTTCTGTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR032401--EDC4_WD40
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

Pfam

PF16529--Ge1_WD40

SMART

SM00320--WD40

Gene Ontology

GO:0000932--C:P-body
GO:0031087--P:deadenylation-independent decapping of nuclear-transcribed mRNA

KEGG

ppp:PHYPADRAFT_193513

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000781	Aegilops tauschii	53.67	2.00e-126	446.00
IUUC-Atr-002815	Amborella trichopoda	50.34	8.00e-150	524.00
IUUC-Aly-005827	Arabidopsis lyrata	52.86	6.00e-119	421.00
IUUC-Ath-006603	Arabidopsis thaliana	52.38	2.00e-118	419.00
IUUC-Bdi-014578	Brachypodium distachyon	53.47	6.00e-129	454.00
IUUC-Bol-015338	Brassica oleracea	52.27	1.00e-126	447.00
IUUC-Bra-017692	Brassica rapa	52.44	1.00e-125	443.00
IUUC-Gma-044019	Glycine max	56.47	2.00e-139	489.00
IUUC-Hvu-047656	Hordeum vulgare	55.21	4.00e-128	452.00
IUUC-Lpe-051585	Leersia perrieri	53.14	1.00e-125	443.00
IUUC-Mtr-057889	Medicago truncatula	53.99	4.00e-134	472.00
IUUC-Mac-064436	Musa acuminata	54.59	3.00e-135	476.00
IUUC-Oba-075599	Oryza barthii	52.41	1.00e-123	437.00
IUUC-Obr-076020	Oryza brachyantha	54.81	4.00e-126	445.00
IUUC-Ogl-077350	Oryza glaberrima	53.36	6.00e-126	445.00
IUUC-Ogu-079010	Oryza glumaepatula	52.41	1.00e-123	437.00
IUUC-Oin-079723	Oryza indica	52.41	8.00e-124	437.00
IUUC-Olo-080788	Oryza longistaminata	52.38	5.00e-125	441.00
IUUC-Ome-081610	Oryza meridionalis	52.41	1.00e-123	437.00
IUUC-Oni-082323	Oryza nivara	53.36	3.00e-125	442.00
IUUC-Opu-084175	Oryza punctata	53.18	5.00e-125	441.00
IUUC-Oru-084677	Oryza rufipogon	53.36	1.00e-125	444.00
IUUC-Osa-085798	Oryza sativa	53.36	7.00e-126	444.00
IUUC-Pop-099921	Populus trichocarpa	58.10	2.00e-138	486.00
IUUC-Sit-110590	Setaria italica	54.37	7.00e-128	451.00
IUUC-Sly-111353	Solanum lycopersicum	56.32	5.00e-131	462.00
IUUC-Sbi-114653	Sorghum bicolor	55.08	3.00e-128	452.00
IUUC-Tca-121627	Theobroma cacao	57.45	3.00e-139	489.00
IUUC-Tae-125553	Triticum aestivum	55.45	4.00e-129	455.00
IUUC-Tur-126244	Triticum urartu	53.44	3.00e-125	442.00
IUUC-Vvi-131361	Vitis vinifera	57.45	4.00e-136	479.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence