iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-001043

Ensembl Protein ID

EMT07868

UniProt Accession

M8BY44; M8BY44_AEGTA

Genbank Protein ID

EMT07868.1

Protein Name

RING-H2 finger protein ATL1A

Genbank Nucleotide ID

KD571108

Gene Name

F775_04183

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_04183	EMT07868	EMT07868

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.00e-08	35.4	161	203

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl +f   ++ +++lp C Hvfha+C+  w        + ++CPlCr
   Q: 161  CAVCLGEFqegER-VRLLPgCLHVFHAECIDTW------LHGCASCPLCR 203
           ********66444.*******************......**********8 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MDADGAGRAP VFPVPQQQAP SSTTPLAPYY YYSSSSSPAT PSRLTHHVTL SLTSLPILVL 60
TVLGILTTSA LLLTYYVFVI RCCLTWHATA SDSSTPNSGA PRSLVHLPHP PPPSPQQHPL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATGCAG ACGGAGCAGG GAGGGCCCCC GTCTTCCCGG TGCCGCAGCA GCAGGCCCCG 60
TCGTCCACGA CGCCGCTGGC ACCCTACTAC TACTACTCTT CATCGTCTTC TCCGGCGACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0472--Membrane
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

ats:F775_04183

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006087	Arabidopsis lyrata	38.55	2.00e-31	129.00
IUUC-Bdi-014676	Brachypodium distachyon	53.45	2.00e-36	144.00
IUUC-Cre-022755	Chlamydomonas reinhardtii	56.25	3.00e-12	62.00
IUUC-Gma-044354	Glycine max	34.59	1.00e-20	93.20
IUUC-Lpe-051091	Leersia perrieri	50.63	3.00e-35	141.00
IUUC-Mac-065300	Musa acuminata	37.45	4.00e-36	144.00
IUUC-Oba-075181	Oryza barthii	51.05	3.00e-37	148.00
IUUC-Obr-076646	Oryza brachyantha	51.37	5.00e-38	150.00
IUUC-Ogl-077643	Oryza glaberrima	51.05	2.00e-37	148.00
IUUC-Ogu-078678	Oryza glumaepatula	51.05	4.00e-37	148.00
IUUC-Oin-080156	Oryza indica	51.90	2.00e-37	149.00
IUUC-Olo-080454	Oryza longistaminata	48.66	4.00e-38	151.00
IUUC-Oni-082085	Oryza nivara	51.05	1.00e-37	149.00
IUUC-Opu-083709	Oryza punctata	44.48	1.00e-36	145.00
IUUC-Oru-084579	Oryza rufipogon	50.63	2.00e-36	145.00
IUUC-Osa-085466	Oryza sativa	50.21	8.00e-36	143.00
IUUC-Sit-110640	Setaria italica	51.19	2.00e-28	119.00
IUUC-Sbi-114204	Sorghum bicolor	48.04	1.00e-30	126.00
IUUC-Tae-122936	Triticum aestivum	85.85	2.00e-97	347.00
IUUC-Tur-126376	Triticum urartu	72.81	3.00e-80	291.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence