iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099090

Ensembl Protein ID

POPTR_0002s19020.1

UniProt Accession

B9GSZ1; B9GSZ1_POPTR

Genbank Protein ID

EEE80815.2

Protein Name

Transducin family protein

Genbank Nucleotide ID

CM000338

Gene Name

POPTRDRAFT_755707; POPTR_0002s19020g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s19020	POPTR_0002s19020.1	POPTR_0002s19020.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.70e-19	68.1	260	294

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           gH++s++ +a+ sd   lvs sdD + ++W +r+ 
   Q: 260  GHEGSIFRIAWsSDgSKLVSVSDDRSARIWAVRDE 294
           8***********99999**************9986 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MEEQQQKQSR WKLERGHYLG EISALCFLHP PSNLSSLPFL LAGTGSQLLL YNLESGKIIK 60
SFEVFDGIRV HGITCSSSEE ESSNFPSLTV SFKIAVFGEK RLKLFNLHIQ TPSQVNADLA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAGAGC AGCAGCAGAA ACAGAGCAGG TGGAAACTAG AGAGAGGGCA TTACCTAGGA 60
GAAATATCAG CTCTCTGTTT CCTCCACCCT CCTTCTAACC TCTCTTCTCT CCCTTTCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

pop:POPTR_0002s19020g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000976	Aegilops tauschii	39.77	0.00e+00	751.00
IUUC-Aml-001786	Ailuropoda melanoleuca	26.69	5.00e-27	116.00
IUUC-Atr-003053	Amborella trichopoda	45.78	0.00e+00	1175.00
IUUC-Aca-004886	Anolis carolinensis	29.28	4.00e-33	136.00
IUUC-Aly-005509	Arabidopsis lyrata	51.34	0.00e+00	1391.00
IUUC-Ath-007109	Arabidopsis thaliana	51.30	0.00e+00	1376.00
IUUC-Ago-007817	Ashbya gossypii	25.94	9.00e-21	95.50
IUUC-Acl-008020	Aspergillus clavatus	25.76	5.00e-10	60.10
IUUC-Afu-009035	Aspergillus fumigatus	22.80	2.00e-11	64.70
IUUC-Ani-009359	Aspergillus nidulans	24.21	4.00e-11	63.50
IUUC-Ang-009692	Aspergillus niger	24.69	2.00e-11	64.70
IUUC-Aor-010056	Aspergillus oryzae	22.75	2.00e-11	64.70
IUUC-Ate-010299	Aspergillus terreus	23.85	1.00e-07	52.00
IUUC-Ame-011051	Astyanax mexicanus	28.00	1.00e-18	89.00
IUUC-Bgr-012077	Blumeria graminis	25.46	3.00e-13	70.90
IUUC-Bta-012793	Bos taurus	26.69	2.00e-26	114.00
IUUC-Bci-013679	Botrytis cinerea	23.95	1.00e-15	79.00
IUUC-Bdi-014401	Brachypodium distachyon	43.27	0.00e+00	1058.00
IUUC-Bol-015628	Brassica oleracea	51.86	0.00e+00	1209.00
IUUC-Bra-017446	Brassica rapa	51.24	0.00e+00	1316.00
IUUC-Cja-018910	Callithrix jacchus	27.27	3.00e-27	117.00
IUUC-Cfa-021260	Canis familiaris	26.39	4.00e-26	113.00
IUUC-Cpo-022205	Cavia porcellus	26.38	2.00e-26	114.00
IUUC-Csa-023510	Chlorocebus sabaeus	27.54	2.00e-27	118.00
IUUC-Cme-027170	Cyanidioschyzon merolae	27.52	1.00e-07	52.80
IUUC-Dre-028004	Danio rerio	27.51	3.00e-23	103.00
IUUC-Dno-029804	Dasypus novemcinctus	26.67	1.00e-24	108.00
IUUC-Dor-030512	Dipodomys ordii	24.35	2.00e-17	84.70
IUUC-Dme-032047	Drosophila melanogaster	24.50	9.00e-10	58.90
IUUC-Ete-033076	Echinops telfairi	28.22	2.00e-23	104.00
IUUC-Eca-033727	Equus caballus	37.50	2.00e-14	74.30
IUUC-Eeu-035210	Erinaceus europaeus	26.67	9.00e-23	102.00
IUUC-Fca-035433	Felis catus	26.69	1.00e-26	115.00
IUUC-Fal-036807	Ficedula albicollis	28.00	9.00e-11	61.60
IUUC-Fox-037749	Fusarium oxysporum	23.62	7.00e-17	82.40
IUUC-Fso-038164	Fusarium solani	22.64	7.00e-20	92.80
IUUC-Gmo-039180	Gadus morhua	27.12	8.00e-16	79.00
IUUC-Gga-040482	Gallus gallus	26.82	8.00e-11	62.40
IUUC-Gac-042066	Gasterosteus aculeatus	26.95	5.00e-20	92.80
IUUC-Gma-042704	Glycine max	55.53	0.00e+00	1452.00
IUUC-Ggo-044942	Gorilla gorilla	27.27	1.00e-27	118.00
IUUC-Hsa-046408	Homo sapiens	27.27	2.00e-27	117.00
IUUC-Hvu-047448	Hordeum vulgare	43.89	0.00e+00	998.00
IUUC-Itr-048756	Ictidomys tridecemlineatus	26.69	3.00e-26	114.00
IUUC-Lch-050170	Latimeria chalumnae	29.23	2.00e-32	134.00
IUUC-Lpe-051575	Leersia perrieri	41.28	0.00e+00	984.00
IUUC-Loc-052341	Lepisosteus oculatus	25.38	3.00e-11	64.30
IUUC-Lma-053318	Leptosphaeria maculans	25.00	3.00e-08	54.30
IUUC-Laf-054299	Loxodonta africana	26.22	2.00e-23	104.00
IUUC-Mcc-055438	Macaca mulatta	27.54	2.00e-27	117.00
IUUC-Meu-056206	Macropus eugenii	24.56	1.00e-19	91.70
IUUC-Mor-056928	Magnaporthe oryzae	21.97	1.00e-08	55.50
IUUC-Mpo-057438	Magnaporthe poae	22.18	1.00e-11	65.10
IUUC-Mtr-058455	Medicago truncatula	53.53	0.00e+00	1379.00
IUUC-Mga-059962	Meleagris gallopavo	25.33	2.00e-08	53.90
IUUC-Mvi-060438	Microbotryum violaceum	29.73	9.00e-18	85.50
IUUC-Mmr-061353	Microcebus murinus	26.69	9.00e-27	115.00
IUUC-Mdo-062061	Monodelphis domestica	27.64	2.00e-27	117.00
IUUC-Mmu-064386	Mus musculus	27.43	3.00e-24	107.00
IUUC-Mac-065653	Musa acuminata	45.99	0.00e+00	1164.00
IUUC-Mpu-066420	Mustela putorius furo	26.69	8.00e-27	115.00
IUUC-Mlu-068104	Myotis lucifugus	26.67	1.00e-26	115.00
IUUC-Nfi-068301	Neosartorya fischeri	23.28	6.00e-11	63.20
IUUC-Ncr-068718	Neurospora crassa	26.47	2.00e-09	58.50
IUUC-Nle-069836	Nomascus leucogenys	27.27	1.00e-27	118.00
IUUC-Ont-071605	Oreochromis niloticus	22.20	1.00e-31	131.00
IUUC-Oan-073645	Ornithorhynchus anatinus	28.30	5.00e-34	139.00
IUUC-Ocu-074708	Oryctolagus cuniculus	26.09	5.00e-25	109.00
IUUC-Oba-075290	Oryza barthii	42.81	0.00e+00	1006.00
IUUC-Obr-076647	Oryza brachyantha	42.41	0.00e+00	1007.00
IUUC-Ogl-077628	Oryza glaberrima	43.36	0.00e+00	1043.00
IUUC-Ogu-078209	Oryza glumaepatula	42.05	0.00e+00	968.00
IUUC-Oin-079342	Oryza indica	43.08	0.00e+00	1049.00
IUUC-Olo-080334	Oryza longistaminata	41.51	0.00e+00	912.00
IUUC-Ome-081776	Oryza meridionalis	43.87	0.00e+00	702.00
IUUC-Oni-082311	Oryza nivara	43.08	0.00e+00	1048.00
IUUC-Opu-083195	Oryza punctata	42.85	0.00e+00	938.00
IUUC-Oru-085006	Oryza rufipogon	42.67	0.00e+00	1006.00
IUUC-Osa-085317	Oryza sativa	43.22	0.00e+00	1043.00
IUUC-Ola-087145	Oryzias latipes	27.01	6.00e-24	106.00
IUUC-Olu-087785	Ostreococcus lucimarinus	28.81	2.00e-27	117.00
IUUC-Oga-088206	Otolemur garnettii	26.39	4.00e-27	116.00
IUUC-Oar-089802	Ovis aries	26.69	5.00e-26	113.00
IUUC-Ptr-091528	Pan troglodytes	27.30	2.00e-23	104.00
IUUC-Pan-092782	Papio anubis	27.54	2.00e-27	117.00
IUUC-Psi-093102	Pelodiscus sinensis	27.30	2.00e-26	113.00
IUUC-Pno-095063	Phaeosphaeria nodorum	22.71	4.00e-07	50.10
IUUC-Ppa-095436	Physcomitrella patens	35.82	0.00e+00	766.00
IUUC-Pfo-097423	Poecilia formosa	28.78	1.00e-24	108.00
IUUC-Pab-097763	Pongo abelii	27.27	1.00e-27	118.00
IUUC-Pca-100173	Procavia capensis	29.62	1.00e-24	108.00
IUUC-Ppe-101580	Prunus persica	58.79	0.00e+00	1599.00
IUUC-Pva-102715	Pteropus vampyrus	26.69	3.00e-27	117.00
IUUC-Pgr-103424	Puccinia graminis	31.94	1.00e-11	65.10
IUUC-Pte-104316	Pyrenophora teres	22.56	3.00e-11	64.30
IUUC-Pyt-104676	Pyrenophora triticirepentis	21.52	4.00e-10	60.50
IUUC-Rno-105122	Rattus norvegicus	27.83	6.00e-29	122.00
IUUC-Sce-106465	Saccharomyces cerevisiae	23.45	5.00e-17	82.80
IUUC-Sha-107208	Sarcophilus harrisii	27.49	2.00e-23	104.00
IUUC-Sja-107771	Schizosaccharomyces japonicus	23.38	2.00e-15	78.20
IUUC-Spo-108272	Schizosaccharomyces pombe	24.87	9.00e-18	85.50
IUUC-Smo-108961	Selaginella moellendorffii	29.33	2.00e-99	357.00
IUUC-Sit-109932	Setaria italica	42.95	0.00e+00	1051.00
IUUC-Sly-111685	Solanum lycopersicum	51.59	0.00e+00	1415.00
IUUC-Sar-112998	Sorex araneus	27.64	7.00e-27	115.00
IUUC-Sbi-114074	Sorghum bicolor	44.49	0.00e+00	1066.00
IUUC-Ssc-115619	Sus scrofa	26.98	4.00e-27	116.00
IUUC-Tgu-117485	Taeniopygia guttata	27.11	1.00e-09	57.80
IUUC-Tru-118104	Takifugu rubripes	27.36	7.00e-27	115.00
IUUC-Tni-119995	Tetraodon nigroviridis	28.10	3.00e-23	103.00
IUUC-Tca-121790	Theobroma cacao	61.09	0.00e+00	1697.00
IUUC-Tre-122080	Trichoderma reesei	24.34	9.00e-09	55.80
IUUC-Tae-125371	Triticum aestivum	43.81	0.00e+00	1091.00
IUUC-Tur-126787	Triticum urartu	43.11	0.00e+00	1046.00
IUUC-Tme-126957	Tuber melanosporum	30.18	2.00e-10	60.80
IUUC-Tbe-128082	Tupaia belangeri	34.58	2.00e-13	70.90
IUUC-Ttr-128387	Tursiops truncatus	26.98	2.00e-26	114.00
IUUC-Vvi-131701	Vitis vinifera	59.69	0.00e+00	1625.00
IUUC-Xtr-132622	Xenopus tropicalis	31.46	1.00e-34	142.00
IUUC-Xma-134014	Xiphophorus maculatus	30.09	1.00e-28	121.00
IUUC-Zma-135732	Zea mays	44.37	0.00e+00	1103.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence