iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-100091

Ensembl Protein ID

POPTR_0015s01200.1

UniProt Accession

B9IDM8; B9IDM8_POPTR

Genbank Protein ID

EEF05515.1

Protein Name

WD-40 repeat family protein

Genbank Nucleotide ID

CM000351

Gene Name

POPTRDRAFT_900585; POPTR_0015s01200g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0015s01200	POPTR_0015s01200.1	POPTR_0015s01200.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-25	88.9	417	448

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDl 30
           H++ vtc++f   +d+++ sGs Dg++++W +
   Q: 417  HSNYVTCVQFnpvDDNHFMSGSIDGKVRIWAV 448
           99**********766***************87 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGSLSEEEYR FFDAYEDVAS ISDAKSDSIE IFDSHSSFDN SITRSPPYEL WIKSPGSVQE 60
RRSKFFDWMG VGVDQNGYRN LEEFSLEGES DRIRESSGAV LRKSCFEDEF CSTRSMMSCW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGATTGCCT CGCTTTCTTC ACATATATAG CGAGAGAGAC CAAAAACGCT TACAAATTTT 60
AATGGGTTCT TTGATCTATG CTCTCTTCAC TCTCAGAGAA ATCTCTTAAA CAAAACAAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

pop:POPTR_0015s01200g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000337	Aegilops tauschii	51.59	1.00e-139	489.00
IUUC-Aly-005587	Arabidopsis lyrata	49.39	8.00e-176	610.00
IUUC-Bol-016331	Brassica oleracea	48.44	6.00e-175	607.00
IUUC-Bra-017674	Brassica rapa	48.24	2.00e-161	562.00
IUUC-Gma-043517	Glycine max	58.29	0.00e+00	722.00
IUUC-Lpe-051594	Leersia perrieri	51.74	5.00e-117	414.00
IUUC-Mtr-057948	Medicago truncatula	56.09	0.00e+00	755.00
IUUC-Opu-083689	Oryza punctata	49.11	2.00e-146	511.00
IUUC-Ppe-101700	Prunus persica	66.30	0.00e+00	952.00
IUUC-Sly-111626	Solanum lycopersicum	56.59	0.00e+00	730.00
IUUC-Stu-112511	Solanum tuberosum	57.07	0.00e+00	771.00
IUUC-Sre-114996	Sporisorium reilianum	30.33	2.00e-39	157.00
IUUC-Tca-121772	Theobroma cacao	68.32	0.00e+00	923.00
IUUC-Tur-126854	Triticum urartu	52.43	5.00e-142	497.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence