iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114476

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G502500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g046940	Sb01g046940.1	Sb01g046940.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.30e-10	41.6	134	176

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f   ++ +++lp C H+fh dC+  w       ++++rCP Cr
   Q: 134  CAVCLSEFverER-VRLLPnCSHAFHIDCIDTW------LQGSARCPFCR 176
           ********98666.*******************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDPPPPPFAS SSSSSPSPPS PSSSSSSASI TMVIITVVGI LAAFALLASY YAFVTKCQLL 60
RAVWSRHPPW HRRARGTSGG REEAAYVAGR ASATEDARRG LGLPLIRMLP VVKFTAAACD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATCCTC CGCCACCACC GTTCGCCTCC AGCAGCTCGT CCTCGCCCTC GCCGCCGTCG 60
CCATCGTCGT CGTCGTCCAG CGCGAGCATC ACCATGGTGA TCATCACCGT CGTGGGCATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_01g046940

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000279	Aegilops tauschii	34.43	9.00e-24	103.00
IUUC-Bdi-014879	Brachypodium distachyon	48.58	6.00e-48	183.00
IUUC-Bol-015196	Brassica oleracea	33.45	2.00e-34	139.00
IUUC-Bra-017431	Brassica rapa	31.76	2.00e-35	142.00
IUUC-Gma-043661	Glycine max	36.01	5.00e-35	140.00
IUUC-Hvu-047165	Hordeum vulgare	55.56	3.00e-46	176.00
IUUC-Lpe-050696	Leersia perrieri	59.65	2.00e-65	241.00
IUUC-Mtr-057939	Medicago truncatula	35.74	7.00e-35	140.00
IUUC-Mac-065349	Musa acuminata	40.94	5.00e-41	160.00
IUUC-Ogl-077399	Oryza glaberrima	56.86	2.00e-46	177.00
IUUC-Ogu-078506	Oryza glumaepatula	56.77	3.00e-58	217.00
IUUC-Oin-079333	Oryza indica	57.42	2.00e-64	238.00
IUUC-Ome-081367	Oryza meridionalis	56.77	2.00e-57	214.00
IUUC-Oni-082867	Oryza nivara	57.10	9.00e-61	226.00
IUUC-Opu-083577	Oryza punctata	58.11	6.00e-54	202.00
IUUC-Oru-085026	Oryza rufipogon	56.45	8.00e-58	216.00
IUUC-Osa-085330	Oryza sativa	57.19	2.00e-58	218.00
IUUC-Pop-099094	Populus trichocarpa	35.96	3.00e-30	124.00
IUUC-Ppe-101210	Prunus persica	35.47	2.00e-30	125.00
IUUC-Sit-109832	Setaria italica	69.49	8.00e-80	289.00
IUUC-Stu-111992	Solanum tuberosum	34.78	3.00e-31	128.00
IUUC-Tca-121116	Theobroma cacao	36.79	8.00e-38	150.00
IUUC-Tae-125003	Triticum aestivum	54.17	4.00e-55	207.00
IUUC-Vvi-131101	Vitis vinifera	36.15	2.00e-33	135.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence