iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121472

Ensembl Protein ID

EOY17226

UniProt Accession

A0A061FJJ7; A0A061FJJ7_THECC

Genbank Protein ID

EOY17226.1

Protein Name

Protease-associated RING/U-box zinc finger family protein

Genbank Nucleotide ID

CM001886

Gene Name

TCM_036380

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_036380	EOY17226	EOY17226

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.50e-07	31.6	277	319

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCled+   ++ +++lpC H fha C+  w     ++  +  CP+C+
   Q: 277  CAICLEDYtmgEK-LRILPCRHKFHAFCVDSW-----LTTWRTFCPVCK 319
           ********98555.******************.....4444555****6 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MYLFPSKPTP QNQTSFFPNR ELGFFFSLGS TFFFGFNFWM KMNRVVVLLL LWFLCLLSAS 60
WMTSASVVLI GKNVTLSFDD IEANFAPAIE GSGECGVLYL AEPLDACSDL SNKVEEVSNV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAACAGAATA AAAAAAAAAT TTCATCTCGG TTCAGAGATT GTGTTGGCAC TCATTAGTAT 60
CATAAGACTT AGAAGGCAGA ATCCAAAGAT TCAGATATTC TATATCCTCT CTTTGTATTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0472--Membrane
KW-0645--Protease
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR003137--PA_domain
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF02225--PA
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008233--F:peptidase activity
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000889	Aegilops tauschii	68.33	6.00e-83	300.00
IUUC-Atr-003055	Amborella trichopoda	76.00	9.00e-122	429.00
IUUC-Aly-006479	Arabidopsis lyrata	72.16	4.00e-114	403.00
IUUC-Ath-007344	Arabidopsis thaliana	73.26	1.00e-115	409.00
IUUC-Bdi-014560	Brachypodium distachyon	56.11	1.00e-109	389.00
IUUC-Bol-015569	Brassica oleracea	74.26	3.00e-118	417.00
IUUC-Bra-017689	Brassica rapa	72.39	3.00e-118	417.00
IUUC-Cel-018181	Caenorhabditis elegans	31.23	1.00e-16	80.10
IUUC-Cfa-020540	Canis familiaris	33.20	1.00e-26	113.00
IUUC-Cin-025554	Ciona intestinalis	36.19	8.00e-30	123.00
IUUC-Csv-025959	Ciona savignyi	35.11	2.00e-26	112.00
IUUC-Cgl-026578	Colletotrichum gloeosporioides	53.19	2.00e-13	69.70
IUUC-Cne-026985	Cryptococcus neoformans	43.94	7.00e-12	65.50
IUUC-Dme-031765	Drosophila melanogaster	32.95	2.00e-31	129.00
IUUC-Gma-043776	Glycine max	82.13	5.00e-126	443.00
IUUC-Hvu-047205	Hordeum vulgare	70.91	6.00e-111	393.00
IUUC-Lch-050034	Latimeria chalumnae	31.67	1.00e-27	116.00
IUUC-Lpe-051192	Leersia perrieri	61.56	1.00e-116	412.00
IUUC-Mtr-058129	Medicago truncatula	72.99	7.00e-140	489.00
IUUC-Mac-064645	Musa acuminata	63.48	3.00e-124	437.00
IUUC-Ncr-068696	Neurospora crassa	51.06	3.00e-13	69.30
IUUC-Opr-070934	Ochotona princeps	55.77	3.00e-14	72.00
IUUC-Ont-071868	Oreochromis niloticus	34.25	3.00e-28	118.00
IUUC-Oba-075841	Oryza barthii	58.01	3.00e-112	397.00
IUUC-Obr-076703	Oryza brachyantha	61.93	6.00e-115	407.00
IUUC-Ogl-077861	Oryza glaberrima	62.08	4.00e-117	414.00
IUUC-Ogu-078205	Oryza glumaepatula	60.81	7.00e-115	406.00
IUUC-Oin-080138	Oryza indica	58.06	3.00e-110	390.00
IUUC-Olo-081024	Oryza longistaminata	58.06	7.00e-113	400.00
IUUC-Ome-081844	Oryza meridionalis	60.47	2.00e-113	401.00
IUUC-Oni-082382	Oryza nivara	60.56	3.00e-115	407.00
IUUC-Opu-083162	Oryza punctata	61.56	3.00e-118	418.00
IUUC-Oru-085099	Oryza rufipogon	58.01	1.00e-112	399.00
IUUC-Osa-086175	Oryza sativa	59.57	2.00e-118	418.00
IUUC-Pma-094545	Petromyzon marinus	68.18	1.00e-15	73.60
IUUC-Ppa-095421	Physcomitrella patens	52.36	2.00e-74	271.00
IUUC-Pop-098937	Populus trichocarpa	71.29	1.00e-140	491.00
IUUC-Ppe-101970	Prunus persica	85.60	9.00e-121	425.00
IUUC-Smo-109274	Selaginella moellendorffii	51.46	1.00e-62	232.00
IUUC-Sit-110628	Setaria italica	59.85	4.00e-117	414.00
IUUC-Sly-110842	Solanum lycopersicum	71.46	8.00e-138	482.00
IUUC-Stu-112408	Solanum tuberosum	65.65	9.00e-128	449.00
IUUC-Sbi-114409	Sorghum bicolor	68.73	4.00e-110	390.00
IUUC-Tae-124150	Triticum aestivum	57.68	2.00e-113	402.00
IUUC-Tur-126455	Triticum urartu	56.93	2.00e-106	378.00
IUUC-Vda-129899	Verticillium dahliae	48.94	4.00e-13	68.60
IUUC-Vvi-131355	Vitis vinifera	81.06	1.00e-121	428.00
IUUC-Yli-134649	Yarrowia lipolytica	29.52	3.00e-18	85.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence