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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Ath-006947
Ensembl Protein ID AT3G21060.1
UniProt Accession Q5E915; B9DHL4; Q84W60; Q9LJC6; RBBP_ARATH
Genbank Protein ID BAB01449.1; AEE76455.1; AAO42218.1; AAX12875.1; BAH20231.1
Protein Name Protein RBL; COMPASS-like H3K4 histone methylation complex component RBL; RBBP5-like protein; Retinoblastoma-binding protein-like
Genbank Nucleotide ID AP000604; CP002686; BT004200; BT021105; AK317567
Gene Name RBL; At3g21060; MSA6.10
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT3G21060 AT3G21060.1 AT3G21060.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.00e-16 61.2 68 101
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 4    dsvtclaf..sdtllvsGsdDgtikvWDlrtgvl 35
           + +t++++   +++l++++ D+++ +WD++tg +
   Q: 68   AAITSVSWskYGHRLLVSAADKSLTLWDVSTGEK 101
           679*****853367888888**********9976 PP
   
Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description


     Promotes the expression of FLC and FLC homologs to repress the floral transition.
 Promotes the expression of FLC and FLC homologs to repress the floral transition.
Protein Sequence
(Fasta)
MNAPIIDPLQ GDFPEVIEEY LEHGVIKCVA FNHRGSLLAA GCADGGCVIW DFETRGIAKE 60
IRDNDCSAAI TSVSWSKYGH RLLVSAADKS LTLWDVSTGE KIARTILQQT PLQARLNPGL 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ath-006947|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ACAACACTGG TTAAACCCCA ACCCTTGGTC TAAGTCTAAC GCCGTTAGTC GTTCTTCTCT 60
GTTCTCTCCA TCAAATTCGT CAGAAACCAA AGAAGATTCA TCAATTCTCC TCTAACACCA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-006947|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0005634--C:nucleus
GO:0048188--C:Set1C/COMPASS complex
GO:0010228--P:vegetative to reproductive phase transition of meristem
KEGG ath:AT3G21060
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000616 Aegilops tauschii 59.77 6.00e-161 560.00
IUUC-Aml-002118 Ailuropoda melanoleuca 34.65 2.00e-54 206.00
IUUC-Atr-002777 Amborella trichopoda 66.34 6.00e-180 623.00
IUUC-Apl-004056 Anas platyrhynchos 34.91 7.00e-54 204.00
IUUC-Aca-004999 Anolis carolinensis 37.36 1.00e-53 203.00
IUUC-Aly-006092 Arabidopsis lyrata 95.59 0.00e+00 993.00
IUUC-Ago-007753 Ashbya gossypii 28.29 9.00e-31 127.00
IUUC-Acl-008105 Aspergillus clavatus 31.91 4.00e-44 171.00
IUUC-Afl-008633 Aspergillus flavus 33.11 7.00e-43 167.00
IUUC-Afu-009075 Aspergillus fumigatus 31.08 3.00e-26 111.00
IUUC-Ani-009233 Aspergillus nidulans 34.12 6.00e-48 184.00
IUUC-Ang-009695 Aspergillus niger 34.49 6.00e-46 177.00
IUUC-Aor-009988 Aspergillus oryzae 33.11 7.00e-43 167.00
IUUC-Ate-010313 Aspergillus terreus 32.61 4.00e-43 168.00
IUUC-Ame-011134 Astyanax mexicanus 32.27 7.00e-45 174.00
IUUC-Bgr-012302 Blumeria graminis 33.33 1.00e-41 163.00
IUUC-Bta-012946 Bos taurus 34.12 8.00e-56 210.00
IUUC-Bci-013968 Botrytis cinerea 34.27 1.00e-44 173.00
IUUC-Bdi-014387 Brachypodium distachyon 59.64 9.00e-158 549.00
IUUC-Bra-017414 Brassica rapa 89.14 0.00e+00 908.00
IUUC-Cel-018610 Caenorhabditis elegans 30.79 1.00e-45 176.00
IUUC-Cja-019938 Callithrix jacchus 34.84 1.00e-54 207.00
IUUC-Cfa-020726 Canis familiaris 34.12 2.00e-55 209.00
IUUC-Cpo-021560 Cavia porcellus 33.92 2.00e-43 169.00
IUUC-Cre-022588 Chlamydomonas reinhardtii 55.75 3.00e-28 119.00
IUUC-Csa-024192 Chlorocebus sabaeus 34.12 8.00e-56 210.00
IUUC-Cho-024355 Choloepus hoffmanni 34.40 8.00e-55 207.00
IUUC-Cin-025285 Ciona intestinalis 34.81 7.00e-59 220.00
IUUC-Csv-026366 Ciona savignyi 34.55 4.00e-56 211.00
IUUC-Cgl-026450 Colletotrichum gloeosporioides 30.95 4.00e-39 155.00
IUUC-Cne-027092 Cryptococcus neoformans 31.59 7.00e-45 174.00
IUUC-Cme-027137 Cyanidioschyzon merolae 27.00 2.00e-30 126.00
IUUC-Dre-027374 Danio rerio 36.60 4.00e-55 208.00
IUUC-Dno-030003 Dasypus novemcinctus 34.46 9.00e-51 194.00
IUUC-Dor-030355 Dipodomys ordii 34.30 7.00e-56 211.00
IUUC-Dse-031442 Dothistroma septosporum 32.84 1.00e-48 186.00
IUUC-Dme-031932 Drosophila melanogaster 37.39 1.00e-65 243.00
IUUC-Ete-032858 Echinops telfairi 33.88 6.00e-36 144.00
IUUC-Eca-034217 Equus caballus 34.12 2.00e-55 209.00
IUUC-Eeu-035024 Erinaceus europaeus 34.78 6.00e-52 197.00
IUUC-Fca-035370 Felis catus 34.84 1.00e-54 207.00
IUUC-Fal-036628 Ficedula albicollis 35.19 3.00e-53 202.00
IUUC-Fox-037739 Fusarium oxysporum 32.61 7.00e-45 174.00
IUUC-Fso-038094 Fusarium solani 32.20 7.00e-44 171.00
IUUC-Gmo-039088 Gadus morhua 34.73 4.00e-55 208.00
IUUC-Ggr-040063 Gaeumannomyces graminis 31.35 2.00e-46 179.00
IUUC-Gga-041160 Gallus gallus 35.82 3.00e-54 205.00
IUUC-Gac-041333 Gasterosteus aculeatus 34.60 1.00e-53 203.00
IUUC-Gma-043909 Glycine max 74.22 0.00e+00 694.00
IUUC-Ggo-044657 Gorilla gorilla 34.12 8.00e-56 210.00
IUUC-Hsa-045894 Homo sapiens 34.12 8.00e-56 210.00
IUUC-Hvu-047662 Hordeum vulgare 58.58 5.00e-164 570.00
IUUC-Itr-048125 Ictidomys tridecemlineatus 35.26 3.00e-54 205.00
IUUC-Kpa-049095 Komagataella pastoris 31.28 1.00e-37 150.00
IUUC-Lch-049495 Latimeria chalumnae 42.32 2.00e-26 112.00
IUUC-Lpe-051038 Leersia perrieri 57.66 2.00e-154 538.00
IUUC-Loc-052680 Lepisosteus oculatus 34.13 7.00e-58 217.00
IUUC-Laf-053717 Loxodonta africana 34.84 1.00e-54 207.00
IUUC-Mcc-055007 Macaca mulatta 35.26 2.00e-54 206.00
IUUC-Meu-056494 Macropus eugenii 50.30 5.00e-19 88.60
IUUC-Mor-057173 Magnaporthe oryzae 31.99 5.00e-45 174.00
IUUC-Mpo-057622 Magnaporthe poae 31.78 5.00e-46 177.00
IUUC-Mtr-057672 Medicago truncatula 70.43 0.00e+00 708.00
IUUC-Mla-059057 Melampsora laricipopulina 31.27 3.00e-35 142.00
IUUC-Mga-060037 Meleagris gallopavo 34.78 2.00e-52 199.00
IUUC-Mvi-060321 Microbotryum violaceum 32.84 2.00e-46 179.00
IUUC-Mmr-060755 Microcebus murinus 34.84 1.00e-54 207.00
IUUC-Mdo-061859 Monodelphis domestica 35.82 3.00e-54 205.00
IUUC-Mmu-063755 Mus musculus 34.30 1.00e-55 210.00
IUUC-Mac-065292 Musa acuminata 65.93 0.00e+00 658.00
IUUC-Mpu-065896 Mustela putorius furo 34.12 8.00e-56 210.00
IUUC-Mlu-067927 Myotis lucifugus 34.84 1.00e-54 207.00
IUUC-Nfi-068429 Neosartorya fischeri 30.35 4.00e-45 174.00
IUUC-Ncr-068738 Neurospora crassa 31.86 7.00e-45 174.00
IUUC-Nle-069608 Nomascus leucogenys 34.12 8.00e-56 210.00
IUUC-Opr-070319 Ochotona princeps 34.65 7.00e-54 204.00
IUUC-Ont-071451 Oreochromis niloticus 33.76 2.00e-55 209.00
IUUC-Oan-073445 Ornithorhynchus anatinus 36.89 1.00e-51 196.00
IUUC-Ocu-074341 Oryctolagus cuniculus 34.12 9.00e-56 210.00
IUUC-Oba-075664 Oryza barthii 58.68 1.00e-162 565.00
IUUC-Obr-076630 Oryza brachyantha 58.90 7.00e-157 546.00
IUUC-Ogl-077847 Oryza glaberrima 58.46 3.00e-162 564.00
IUUC-Ogu-077970 Oryza glumaepatula 57.82 8.00e-149 519.00
IUUC-Oin-079374 Oryza indica 58.68 1.00e-162 565.00
IUUC-Olo-080992 Oryza longistaminata 57.80 2.00e-162 565.00
IUUC-Ome-081683 Oryza meridionalis 59.09 7.00e-155 540.00
IUUC-Oni-082594 Oryza nivara 58.68 1.00e-162 565.00
IUUC-Opu-083907 Oryza punctata 59.66 2.00e-164 572.00
IUUC-Oru-084400 Oryza rufipogon 58.68 1.00e-162 565.00
IUUC-Osa-085442 Oryza sativa 58.68 1.00e-162 565.00
IUUC-Ola-086569 Oryzias latipes 34.98 4.00e-55 208.00
IUUC-Oga-088947 Otolemur garnettii 33.71 5.00e-50 191.00
IUUC-Oar-090358 Ovis aries 34.65 2.00e-54 206.00
IUUC-Ptr-091601 Pan troglodytes 34.12 8.00e-56 210.00
IUUC-Pan-092466 Papio anubis 34.12 8.00e-56 210.00
IUUC-Psi-093614 Pelodiscus sinensis 36.77 2.00e-53 202.00
IUUC-Pma-094450 Petromyzon marinus 37.76 4.00e-52 198.00
IUUC-Pno-094819 Phaeosphaeria nodorum 31.54 8.00e-42 164.00
IUUC-Ppa-095157 Physcomitrella patens 55.45 5.00e-65 240.00
IUUC-Pfo-096312 Poecilia formosa 36.25 8.00e-55 207.00
IUUC-Pab-098058 Pongo abelii 34.12 8.00e-56 210.00
IUUC-Pop-099039 Populus trichocarpa 73.22 0.00e+00 739.00
IUUC-Pca-100623 Procavia capensis 34.78 5.00e-52 197.00
IUUC-Ppe-102053 Prunus persica 77.00 0.00e+00 763.00
IUUC-Pva-102779 Pteropus vampyrus 34.27 3.00e-50 192.00
IUUC-Pgr-103398 Puccinia graminis 30.48 5.00e-42 164.00
IUUC-Ptt-103912 Puccinia triticina 30.48 7.00e-43 167.00
IUUC-Pte-104246 Pyrenophora teres 33.26 2.00e-43 169.00
IUUC-Pyt-104582 Pyrenophora triticirepentis 33.03 2.00e-43 169.00
IUUC-Rno-104838 Rattus norvegicus 34.12 2.00e-55 209.00
IUUC-Sce-106229 Saccharomyces cerevisiae 30.51 1.00e-33 136.00
IUUC-Sha-106527 Sarcophilus harrisii 35.82 3.00e-54 205.00
IUUC-Sja-107862 Schizosaccharomyces japonicus 31.91 3.00e-44 172.00
IUUC-Spo-108025 Schizosaccharomyces pombe 33.42 4.00e-44 171.00
IUUC-Ssl-108544 Sclerotinia sclerotiorum 34.27 4.00e-44 171.00
IUUC-Smo-109474 Selaginella moellendorffii 50.87 1.00e-118 419.00
IUUC-Sit-110687 Setaria italica 58.85 3.00e-153 535.00
IUUC-Sly-111597 Solanum lycopersicum 70.74 0.00e+00 687.00
IUUC-Stu-112389 Solanum tuberosum 70.16 0.00e+00 686.00
IUUC-Sar-113284 Sorex araneus 34.10 7.00e-41 160.00
IUUC-Sbi-114362 Sorghum bicolor 55.83 6.00e-152 530.00
IUUC-Sre-115146 Sporisorium reilianum 29.96 1.00e-38 153.00
IUUC-Ssc-115604 Sus scrofa 34.84 8.00e-55 207.00
IUUC-Tru-118258 Takifugu rubripes 34.32 2.00e-55 209.00
IUUC-Tsy-119169 Tarsius syrichta 33.92 2.00e-43 169.00
IUUC-Tni-119939 Tetraodon nigroviridis 36.94 2.00e-54 206.00
IUUC-Tca-121010 Theobroma cacao 73.10 0.00e+00 760.00
IUUC-Tre-121944 Trichoderma reesei 32.13 5.00e-42 164.00
IUUC-Tvi-122283 Trichoderma virens 32.13 6.00e-42 164.00
IUUC-Tur-126395 Triticum urartu 59.92 1.00e-165 575.00
IUUC-Tme-127150 Tuber melanosporum 32.12 2.00e-47 182.00
IUUC-Tbe-127745 Tupaia belangeri 30.70 4.00e-21 95.50
IUUC-Ttr-129187 Tursiops truncatus 34.78 9.00e-52 197.00
IUUC-Uma-129654 Ustilago maydis 27.83 7.00e-33 134.00
IUUC-Vda-129788 Verticillium dahliae 31.72 6.00e-45 174.00
IUUC-Vpa-130182 Vicugna pacos 33.91 3.00e-42 165.00
IUUC-Vvi-131557 Vitis vinifera 75.72 0.00e+00 753.00
IUUC-Xtr-132007 Xenopus tropicalis 36.38 2.00e-55 209.00
IUUC-Xma-133909 Xiphophorus maculatus 34.43 2.00e-55 209.00
IUUC-Yli-134524 Yarrowia lipolytica 30.23 1.00e-44 173.00
IUUC-Zma-134821 Zea mays 56.79 1.00e-157 549.00
Created Date 25-Jun-2017

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