iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Osa-086045

UUCD1 version

UUC-OrS-01264

Ensembl Protein ID

OS03T0240600-01

UniProt Accession

Q10PB1; Q10PB1_ORYSJ

Genbank Protein ID

ABF94888.1; AEK32593.1; BAF11423.1; BAG98618.1; BAS83188.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

DP000009; JN162673; AP008209; AK109161; AP014959

Gene Name

UPS; LOC_Os03g13740; Os03g0240600; OSNPB_030240600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OS03G0240600	OS03T0240600-01	OS03T0240600-01

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/U-box	U-box	24486490

Classification

Family	E-value	Score	Start	End
E3 activity/RING/U-box	7.50e-34	116.6	34	106

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+CpIsl+lMrdPv++p+Gitydr+ Ie wl++g+  cPvt++pl++edlvPn+++rr+iq+wc +n+s
   Q: 34   IPAHFRCPISLDLMRDPVTAPTGITYDREGIEAWLDTGRAVCPVTHAPLRHEDLVPNHAIRRVIQDWCVANRS 106
           89*******************************************************************9986 PP

Organism

Oryza sativa

Protein Sequence
(Fasta)

MALLARRARK AVMAKAPAPL LQKRGGGAAA ELAIPAHFRC PISLDLMRDP VTAPTGITYD 60
REGIEAWLDT GRAVCPVTHA PLRHEDLVPN HAIRRVIQDW CVANRSRGVE RIPTPKIPVT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTATTGAACT CTTCTCAGCT CAAAGCCTTA CACCACAACA CGCAGCTGTT CTCGCTGGGC 60
TTCTCTTCTT GCGCTGCGGT GATCGATCGA GAGCTTGGGA TGGCGCTGCT GGCGCGGAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0016874--F:ligase activity
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

osa:4332204

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003111	Amborella trichopoda	45.69	4.00e-99	353.00
IUUC-Aly-006049	Arabidopsis lyrata	38.11	6.00e-65	240.00
IUUC-Ath-007695	Arabidopsis thaliana	38.52	9.00e-64	236.00
IUUC-Bdi-014295	Brachypodium distachyon	77.27	1.00e-162	565.00
IUUC-Bol-015846	Brassica oleracea	41.91	3.00e-75	274.00
IUUC-Bra-017718	Brassica rapa	41.67	6.00e-77	280.00
IUUC-Lpe-050847	Leersia perrieri	80.67	0.00e+00	641.00
IUUC-Mtr-057926	Medicago truncatula	43.13	6.00e-86	310.00
IUUC-Mac-064511	Musa acuminata	49.22	3.00e-93	334.00
IUUC-Oba-075321	Oryza barthii	85.07	5.00e-63	233.00
IUUC-Obr-076825	Oryza brachyantha	94.72	5.00e-127	445.00
IUUC-Ogl-076969	Oryza glaberrima	100.00	0.00e+00	724.00
IUUC-Ogu-078872	Oryza glumaepatula	97.02	0.00e+00	746.00
IUUC-Oin-079622	Oryza indica	100.00	0.00e+00	724.00
IUUC-Olo-080664	Oryza longistaminata	97.60	8.00e-146	508.00
IUUC-Ome-081144	Oryza meridionalis	95.27	2.00e-154	538.00
IUUC-Oni-082871	Oryza nivara	100.00	0.00e+00	724.00
IUUC-Opu-084061	Oryza punctata	92.04	0.00e+00	681.00
IUUC-Oru-084561	Oryza rufipogon	99.77	0.00e+00	723.00
IUUC-Olu-087884	Ostreococcus lucimarinus	61.19	2.00e-23	99.40
IUUC-Pop-099112	Populus trichocarpa	45.18	8.00e-93	333.00
IUUC-Sit-109976	Setaria italica	82.08	4.00e-177	613.00
IUUC-Sly-110989	Solanum lycopersicum	42.48	3.00e-97	347.00
IUUC-Stu-112581	Solanum tuberosum	45.10	1.00e-92	332.00
IUUC-Sbi-114180	Sorghum bicolor	80.66	6.00e-165	572.00
IUUC-Tca-120967	Theobroma cacao	48.33	2.00e-89	321.00
IUUC-Tae-122962	Triticum aestivum	78.01	5.00e-171	592.00
IUUC-Tur-126397	Triticum urartu	78.57	5.00e-87	312.00
IUUC-Vvi-131485	Vitis vinifera	50.24	5.00e-98	350.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence