iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114340

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G422900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g039760	Sb01g039760.1	Sb01g039760.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.10e-08	33.9	135	176

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C+e f+ g   + +pC+Hv+h+dC+  w       s + +CP+Cr
   Q: 135  CAVCQEAFEPGaaGREMPCKHVYHQDCILPW------LSLRNSCPVCR 176
           ********4433366799*************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MESSPVSYWC YSCSRFVRVS PSTVVCPECD GGFLEQFTQP PPRGGGGSGR RGTMNPVIVL 60
RGGSLSGFEL YYDDGAGEGL RPLPGDVQHL LMGSGFHRLL DQFSRLEAAA PRPPASKAAV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATTCCCCTC CCGTCCCCTC CCGTCGTCGT CTCCCCCCTC ACCCGAAACC CCGATTCGAA 60
GCCGGCGGAG TTCGATTTGG GGATTTCGGC GCCTCGCTCC CCGAAATCTC CTGGATCTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR010543--DUF1117
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF06547--DUF1117
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_01g039760

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014239	Brachypodium distachyon	89.02	6.00e-104	369.00
IUUC-Bra-016900	Brassica rapa	49.03	3.00e-54	204.00
IUUC-Gma-043439	Glycine max	51.20	1.00e-68	252.00
IUUC-Hvu-047366	Hordeum vulgare	89.81	9.00e-60	221.00
IUUC-Lpe-051674	Leersia perrieri	92.80	2.00e-111	394.00
IUUC-Oba-075196	Oryza barthii	89.02	2.00e-102	364.00
IUUC-Obr-076880	Oryza brachyantha	93.84	5.00e-90	322.00
IUUC-Ogl-077642	Oryza glaberrima	93.18	7.00e-112	395.00
IUUC-Ogu-078379	Oryza glumaepatula	93.18	7.00e-112	395.00
IUUC-Oin-080146	Oryza indica	92.80	6.00e-111	392.00
IUUC-Olo-080426	Oryza longistaminata	92.96	4.00e-60	222.00
IUUC-Ome-081916	Oryza meridionalis	92.05	4.00e-111	392.00
IUUC-Oni-082624	Oryza nivara	92.80	6.00e-111	392.00
IUUC-Opu-084123	Oryza punctata	92.80	6.00e-112	395.00
IUUC-Oru-084604	Oryza rufipogon	93.18	7.00e-112	395.00
IUUC-Osa-086067	Oryza sativa	93.18	7.00e-112	395.00
IUUC-Sit-109708	Setaria italica	96.23	2.00e-113	400.00
IUUC-Tae-125142	Triticum aestivum	88.93	4.00e-109	386.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence