iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017829

Ensembl Protein ID

Bra020638.1-P

UniProt Accession

M4DVU4; M4DVU4_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra020638	Bra020638.1	Bra020638.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.00e-25	87.8	282	318
UBD/Beta-Prp	7.50e-44	151.1	232	359

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH++++t+la  s+ t+++s+s+D++i+vW+l +g +
   Q: 282  GHEGDITDLAVnSNnTFIASASNDCVIRVWRLPDGLP 318
           8**********9555*****************99976 PP

UBD/Beta-Prp

   S: 84   gkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltggh 179
            + +  l+gh + v++  +++sg ++++Gs+dr ++vw +et +cl    +gh+g ++ ++v++++  ++s+s+D ++r+W+l+ g  +  l+g h
   Q: 232  MQNIKRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMETAYCLA-SCRGHEGDITDLAVNSNNTFIASASNDCVIRVWRLPDGLPVSVLRG-H 325
           56677899999999999999999999999999999999999999999.9999999999999999999999999999999999999999999999.9 PP
   S: 180  tdsvyslsfdsng...kelvsgsldgtvklwdlq 210
            ++++ ++f++      +l+s s+dgt ++wd +
   Q: 326  IGAITAIAFSPRPgspYQLLSSSDDGTCRIWDAR 359
           9999999999987889999999999999999976 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MALRKNTPKA DSVSLPMKPL NFSRKLPGND PDIAQDVVRT DIDLDQREVY FLMLHLLSSG 60
PCQRTYALLR HELLEHELLP RRYHAWYSRS GLPSGDENDD GNSFPLNYAE LAKRYSHVKR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTCTTA GGAAAAATAC TCCGAAAGCT GATTCGGTCT CTCTCCCTAT GAAGCCTTTG 60
AATTTTTCCA GAAAGTTGCC AGGGAATGAC CCAGATATTG CTCAAGATGT TGTGCGGACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001487--Bromodomain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50014--BROMODOMAIN_2
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00439--Bromodomain
PF00400--WD40

SMART

SM00297--BROMO
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-015909	Brassica oleracea	94.46	0.00e+00	2973.00
IUUC-Cpo-021934	Cavia porcellus	30.52	1.00e-76	282.00
IUUC-Cho-024690	Choloepus hoffmanni	27.64	4.00e-34	141.00
IUUC-Cin-025702	Ciona intestinalis	35.48	1.00e-29	122.00
IUUC-Dre-028205	Danio rerio	32.19	2.00e-81	298.00
IUUC-Fal-037307	Ficedula albicollis	31.25	2.00e-76	281.00
IUUC-Gga-040865	Gallus gallus	30.86	2.00e-75	278.00
IUUC-Gac-042435	Gasterosteus aculeatus	29.94	4.00e-62	233.00
IUUC-Lpe-051619	Leersia perrieri	48.85	0.00e+00	1291.00
IUUC-Mga-060165	Meleagris gallopavo	30.92	1.00e-74	275.00
IUUC-Olu-087745	Ostreococcus lucimarinus	31.94	3.00e-72	267.00
IUUC-Pfo-097318	Poecilia formosa	31.49	1.00e-77	285.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence