iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111301

Ensembl Protein ID

Solyc06g053840.2.1

UniProt Accession

G9HPV5; G9HPV5_SOLLC

Genbank Protein ID

AEX00350.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

JN379434

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc06g053840.2	Solyc06g053840.2.1	Solyc06g053840.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	2.60e-17	63.5	94	179

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 2    vrvkvsykgeirsfaldlekpgkfedLlkavrt.lt..........elknsevalkYeDedGDlvtlksDedldkavsllaskksllrlli 81
           + vkvs++g+++++++dl+ + ++ +Llka+++ ++          ++k+se+a+ YeD+dGDl+ l++D+++++++s      s++rl+i
   Q: 94   MYVKVSMDGAPYLRKIDLKLYKGYPELLKALEKmFKlsigeysereGYKGSEFAPAYEDKDGDLM-LVGDVPFEMFLS------SCKRLRI 177
           579******************************6448899999999*******************.************......******* PP
   S: 82   qk 83
           +k
   Q: 178  MK 179
           *8 PP

Organism

Solanum lycopersicum

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MECVLAHEKD LNLKATELRL GLPGRTDEES DKEIVFHFKN NKRALPEDED CESNSISDPK 60
TPPVAKTQIV GWPPVRANRK NSFPSKKAEA ECGMYVKVSM DGAPYLRKID LKLYKGYPEL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGGTGGACC CTCTATATAC AGCTCTCTTA TTTCACTTTC TCCTTATATA TTACAGCAAG 60
CTACCATTTA GCATCTTCAA ACCAATCTTG GAGAAGAAAA ATCATCAGTT TTGGAGAAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

sly:101255303

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bgr-012301	Blumeria graminis	43.90	5.40e-02	31.60
IUUC-Ggo-045067	Gorilla gorilla	29.73	5.30e-01	26.90
IUUC-Lpe-051475	Leersia perrieri	45.81	2.00e-37	147.00
IUUC-Ptt-103794	Puccinia triticina	45.83	4.70e-02	32.70
IUUC-Stu-112901	Solanum tuberosum	97.37	3.00e-106	376.00
IUUC-Tae-124584	Triticum aestivum	50.96	3.00e-42	163.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence