iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olu-087639

Ensembl Protein ID

ABO95496

UniProt Accession

A4RVT0; A4RVT0_OSTLU

Genbank Protein ID

ABO95496.1

Protein Name

Coatomer subunit alpha

Genbank Nucleotide ID

CP000584

Gene Name

OSTLU_24382

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OSTLU_24382	ABO95496	ABO95496

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.00e-39	129.6	50	80
UBD/Beta-Prp	9.00e-77	256.7	3	322

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           H+++v++++f s+ +l+vsG+dD +ikvW++
   Q: 50   HEGPVRGVHFhSSqPLFVSGGDDYKIKVWSY 80
           9**********767***************95 PP

UBD/Beta-Prp

   S: 4    tlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp 104
           t +++++++++ ++f+p++++++++  +g i++wd+++g+l+ ++ +he++v+ v f+++++++v+g++D+ ikvw+++ + c+ tl gh d++++++f++
   Q: 3    TKFETKSNRVKGLAFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHSSQPLFVSGGDDYKIKVWSYKLRRCMFTLLGHLDYIRTVEFHQ 103
           67889999********************************************************************************************* PP
   S: 105  sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl..............ktgkllrtl...........tgght 180
           +  ++vs+s+d+tir+w++++++ +  +l+gh++ v+c+++h +++l+vs+slD+tvr+Wd+              ++ ++  +l            +gh+
   Q: 104  EYPWIVSASDDQTIRIWNWQSRSSIA-VLTGHNHYVMCARFHHKDDLVVSASLDQTVRVWDIsglrrkavspadelRMPQMNNDLfgggdtvvkyiLEGHD 203
           **************************.*************************************************55555555555555555555555** PP
   S: 181  dsvyslsfdsngkelvsgsldgtvklwdlqtgec..vrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnv 279
           + v++ +f+++ + +vsg++d++vklw +  ++   v++l+gh +nv++v+f+ +++ +vs s+D+sir+Wd+ ++   +t+ ++n++++  a+ +++ n 
   Q: 204  RGVNWAAFHPTLPLIVSGADDRQVKLWRMNDTKAweVDSLRGHVNNVSCVAFHARQDVIVSNSEDKSIRVWDMSKRADAQTFRRENDRFWILAA-HPEVNL 303
           ******************************777668**********************************************************.777666 PP
   S: 280  lvlgsedskvniwklkknep 299
           l++g  ds   ++kl++++p
   Q: 304  LAAG-HDSGMIVFKLERERP 322
           5555.689999999988765 PP

Organism

Ostreococcus lucimarinus

Functional Description
(View)

The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network.

Protein Sequence
(Fasta)

MLTKFETKSN RVKGLAFHPK RPWILASLHS GVIQLWDYRM GTLIDRFDEH EGPVRGVHFH 60
SSQPLFVSGG DDYKIKVWSY KLRRCMFTLL GHLDYIRTVE FHQEYPWIVS ASDDQTIRIW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCGAGCGCGT CGTCGGCGTT CGCGCGAACG ACGCGCGTGC GACGAACGCA CGACACGCGC 60
GCGCGTCAAA CGCACGCGTC CGCGCGTCGT ACGTTGCCGT TTACGCGCGC GCGCGCGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0931--ER-Golgi transport
KW-0333--Golgi apparatus
KW-0472--Membrane
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0813--Transport
KW-0853--WD repeat

Interpro

IPR016391--Coatomer_asu
IPR010714--Coatomer_asu_C
IPR006692--Coatomer_WD-assoc_reg
IPR020472--G-protein_beta_WD-40_rep
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04053--Coatomer_WDAD
PF06957--COPI_C
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030126--C:COPI vesicle coat
GO:0000139--C:Golgi membrane
GO:0005198--F:structural molecule activity
GO:0006886--P:intracellular protein transport
GO:0016192--P:vesicle-mediated transport

KEGG

olu:OSTLU_24382

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000064	Aegilops tauschii	69.17	0.00e+00	1227.00
IUUC-Aml-001758	Ailuropoda melanoleuca	54.86	0.00e+00	1373.00
IUUC-Atr-002493	Amborella trichopoda	72.09	0.00e+00	1247.00
IUUC-Apl-003385	Anas platyrhynchos	50.09	0.00e+00	1066.00
IUUC-Aca-005154	Anolis carolinensis	75.36	1.00e-92	329.00
IUUC-Aly-006020	Arabidopsis lyrata	72.12	0.00e+00	1249.00
IUUC-Ath-007058	Arabidopsis thaliana	72.12	0.00e+00	1248.00
IUUC-Ago-007992	Ashbya gossypii	44.15	0.00e+00	1011.00
IUUC-Acl-008027	Aspergillus clavatus	57.44	0.00e+00	1012.00
IUUC-Afl-008644	Aspergillus flavus	57.31	0.00e+00	1009.00
IUUC-Afu-008964	Aspergillus fumigatus	48.09	0.00e+00	1167.00
IUUC-Ani-009379	Aspergillus nidulans	57.40	0.00e+00	1026.00
IUUC-Ang-009756	Aspergillus niger	57.56	0.00e+00	1015.00
IUUC-Aor-010174	Aspergillus oryzae	57.31	0.00e+00	1009.00
IUUC-Ate-010302	Aspergillus terreus	47.96	0.00e+00	1186.00
IUUC-Ame-011229	Astyanax mexicanus	63.45	0.00e+00	1102.00
IUUC-Bgr-012300	Blumeria graminis	47.52	0.00e+00	1109.00
IUUC-Bta-012524	Bos taurus	55.17	0.00e+00	1362.00
IUUC-Bci-013781	Botrytis cinerea	57.66	0.00e+00	1021.00
IUUC-Bdi-014549	Brachypodium distachyon	67.98	0.00e+00	1217.00
IUUC-Bol-015925	Brassica oleracea	71.88	0.00e+00	1243.00
IUUC-Bra-016978	Brassica rapa	71.52	0.00e+00	1238.00
IUUC-Cel-018115	Caenorhabditis elegans	56.27	0.00e+00	959.00
IUUC-Cja-019107	Callithrix jacchus	53.66	0.00e+00	1336.00
IUUC-Cfa-020675	Canis familiaris	54.45	0.00e+00	1343.00
IUUC-Cpo-021813	Cavia porcellus	55.33	0.00e+00	1382.00
IUUC-Cre-022969	Chlamydomonas reinhardtii	71.27	0.00e+00	1263.00
IUUC-Csa-023523	Chlorocebus sabaeus	55.01	0.00e+00	1381.00
IUUC-Cho-024704	Choloepus hoffmanni	69.28	2.00e-127	448.00
IUUC-Cin-025572	Ciona intestinalis	61.32	0.00e+00	1065.00
IUUC-Csv-025864	Ciona savignyi	59.83	0.00e+00	1019.00
IUUC-Cgl-026510	Colletotrichum gloeosporioides	57.21	0.00e+00	1019.00
IUUC-Cne-027053	Cryptococcus neoformans	59.02	0.00e+00	1035.00
IUUC-Cme-027222	Cyanidioschyzon merolae	41.62	3.00e-151	527.00
IUUC-Dre-027421	Danio rerio	54.58	0.00e+00	1324.00
IUUC-Dno-029303	Dasypus novemcinctus	55.13	0.00e+00	1383.00
IUUC-Dor-030290	Dipodomys ordii	52.83	3.00e-162	563.00
IUUC-Dse-031543	Dothistroma septosporum	47.33	0.00e+00	1091.00
IUUC-Dme-031945	Drosophila melanogaster	63.18	0.00e+00	1045.00
IUUC-Ete-032873	Echinops telfairi	53.53	0.00e+00	1222.00
IUUC-Eca-033773	Equus caballus	54.31	0.00e+00	1344.00
IUUC-Eeu-034874	Erinaceus europaeus	42.11	0.00e+00	691.00
IUUC-Fca-035739	Felis catus	54.27	0.00e+00	1336.00
IUUC-Fal-037263	Ficedula albicollis	51.07	0.00e+00	1224.00
IUUC-Fox-037738	Fusarium oxysporum	48.04	0.00e+00	1161.00
IUUC-Fso-038153	Fusarium solani	47.78	0.00e+00	1145.00
IUUC-Gmo-039602	Gadus morhua	50.20	0.00e+00	1201.00
IUUC-Ggr-039931	Gaeumannomyces graminis	56.56	0.00e+00	1004.00
IUUC-Gga-040590	Gallus gallus	54.69	0.00e+00	1381.00
IUUC-Gac-041318	Gasterosteus aculeatus	53.07	0.00e+00	1338.00
IUUC-Gma-043894	Glycine max	71.36	0.00e+00	1258.00
IUUC-Ggo-045029	Gorilla gorilla	54.54	0.00e+00	1369.00
IUUC-Hsa-046078	Homo sapiens	54.54	0.00e+00	1371.00
IUUC-Hvu-047556	Hordeum vulgare	60.03	0.00e+00	1514.00
IUUC-Itr-048881	Ictidomys tridecemlineatus	46.90	0.00e+00	788.00
IUUC-Kpa-049256	Komagataella pastoris	46.12	0.00e+00	1105.00
IUUC-Lch-049706	Latimeria chalumnae	53.84	0.00e+00	1336.00
IUUC-Lpe-051316	Leersia perrieri	69.78	0.00e+00	1235.00
IUUC-Loc-051867	Lepisosteus oculatus	50.29	0.00e+00	827.00
IUUC-Lma-053138	Leptosphaeria maculans	57.06	0.00e+00	1017.00
IUUC-Laf-053510	Loxodonta africana	54.51	0.00e+00	1380.00
IUUC-Mcc-055836	Macaca mulatta	54.73	0.00e+00	1370.00
IUUC-Meu-056238	Macropus eugenii	57.57	0.00e+00	765.00
IUUC-Mor-057172	Magnaporthe oryzae	48.19	0.00e+00	1140.00
IUUC-Mpo-057300	Magnaporthe poae	56.44	0.00e+00	1005.00
IUUC-Mtr-058248	Medicago truncatula	70.92	0.00e+00	1247.00
IUUC-Mla-059019	Melampsora laricipopulina	60.72	0.00e+00	1079.00
IUUC-Mga-059499	Meleagris gallopavo	54.60	0.00e+00	1378.00
IUUC-Mvi-060336	Microbotryum violaceum	50.98	0.00e+00	1239.00
IUUC-Mmr-061102	Microcebus murinus	55.80	0.00e+00	1361.00
IUUC-Mdo-062594	Monodelphis domestica	56.05	0.00e+00	1383.00
IUUC-Mmu-063736	Mus musculus	54.78	0.00e+00	1370.00
IUUC-Mac-065398	Musa acuminata	64.48	0.00e+00	1118.00
IUUC-Mpu-066701	Mustela putorius furo	54.59	0.00e+00	1376.00
IUUC-Mlu-067392	Myotis lucifugus	54.43	0.00e+00	1374.00
IUUC-Nfi-068270	Neosartorya fischeri	57.56	0.00e+00	1015.00
IUUC-Ncr-068892	Neurospora crassa	57.64	0.00e+00	1020.00
IUUC-Nle-069634	Nomascus leucogenys	66.52	0.00e+00	926.00
IUUC-Opr-070952	Ochotona princeps	41.69	0.00e+00	660.00
IUUC-Ont-072488	Oreochromis niloticus	53.49	0.00e+00	1325.00
IUUC-Oan-073184	Ornithorhynchus anatinus	45.12	5.00e-69	251.00
IUUC-Ocu-074211	Oryctolagus cuniculus	55.09	0.00e+00	1378.00
IUUC-Oba-075761	Oryza barthii	69.54	0.00e+00	1232.00
IUUC-Obr-076429	Oryza brachyantha	69.66	0.00e+00	1232.00
IUUC-Ogl-077364	Oryza glaberrima	69.54	0.00e+00	1232.00
IUUC-Ogu-078257	Oryza glumaepatula	69.66	0.00e+00	1230.00
IUUC-Oin-079274	Oryza indica	69.42	0.00e+00	1230.00
IUUC-Olo-080466	Oryza longistaminata	69.60	0.00e+00	1226.00
IUUC-Ome-081993	Oryza meridionalis	70.57	0.00e+00	1155.00
IUUC-Oni-082608	Oryza nivara	69.78	0.00e+00	1231.00
IUUC-Opu-083885	Oryza punctata	69.54	0.00e+00	1229.00
IUUC-Oru-084274	Oryza rufipogon	69.42	0.00e+00	1230.00
IUUC-Osa-085841	Oryza sativa	69.78	0.00e+00	1233.00
IUUC-Ola-086921	Oryzias latipes	54.44	0.00e+00	1327.00
IUUC-Oga-087991	Otolemur garnettii	52.16	0.00e+00	1281.00
IUUC-Oar-089590	Ovis aries	55.25	0.00e+00	1381.00
IUUC-Ptr-090808	Pan troglodytes	54.54	0.00e+00	1370.00
IUUC-Pan-092475	Papio anubis	54.73	0.00e+00	1370.00
IUUC-Psi-093044	Pelodiscus sinensis	57.19	0.00e+00	915.00
IUUC-Pno-094839	Phaeosphaeria nodorum	55.96	0.00e+00	947.00
IUUC-Ppa-095254	Physcomitrella patens	73.91	0.00e+00	1317.00
IUUC-Pfo-097493	Poecilia formosa	64.05	0.00e+00	1109.00
IUUC-Pab-098497	Pongo abelii	54.93	0.00e+00	1380.00
IUUC-Pop-099992	Populus trichocarpa	72.09	0.00e+00	1251.00
IUUC-Pca-100413	Procavia capensis	59.39	0.00e+00	671.00
IUUC-Ppe-101392	Prunus persica	71.70	0.00e+00	1260.00
IUUC-Pva-102126	Pteropus vampyrus	52.63	0.00e+00	1300.00
IUUC-Pgr-103376	Puccinia graminis	51.89	0.00e+00	1273.00
IUUC-Ptt-103978	Puccinia triticina	45.69	0.00e+00	1046.00
IUUC-Pte-104126	Pyrenophora teres	56.18	0.00e+00	963.00
IUUC-Pyt-104778	Pyrenophora triticirepentis	47.71	0.00e+00	640.00
IUUC-Rno-105428	Rattus norvegicus	55.17	0.00e+00	1377.00
IUUC-Sce-106464	Saccharomyces cerevisiae	43.49	0.00e+00	1000.00
IUUC-Sha-107301	Sarcophilus harrisii	54.54	0.00e+00	1355.00
IUUC-Sja-107961	Schizosaccharomyces japonicus	46.03	0.00e+00	1106.00
IUUC-Spo-108217	Schizosaccharomyces pombe	45.72	0.00e+00	1104.00
IUUC-Ssl-108643	Sclerotinia sclerotiorum	57.54	0.00e+00	1018.00
IUUC-Smo-109582	Selaginella moellendorffii	71.74	0.00e+00	1291.00
IUUC-Sit-109697	Setaria italica	69.42	0.00e+00	1230.00
IUUC-Sly-111759	Solanum lycopersicum	71.68	0.00e+00	1286.00
IUUC-Stu-112564	Solanum tuberosum	71.57	0.00e+00	1284.00
IUUC-Sar-113313	Sorex araneus	45.33	0.00e+00	647.00
IUUC-Sbi-114388	Sorghum bicolor	70.02	0.00e+00	1234.00
IUUC-Sre-115209	Sporisorium reilianum	57.23	0.00e+00	1022.00
IUUC-Ssc-115933	Sus scrofa	55.25	0.00e+00	1380.00
IUUC-Tgu-117109	Taeniopygia guttata	54.99	6.00e-120	422.00
IUUC-Tru-117772	Takifugu rubripes	53.30	0.00e+00	1319.00
IUUC-Tsy-119105	Tarsius syrichta	48.69	0.00e+00	1172.00
IUUC-Tni-120556	Tetraodon nigroviridis	42.01	0.00e+00	896.00
IUUC-Tca-121545	Theobroma cacao	72.20	0.00e+00	1276.00
IUUC-Tre-121951	Trichoderma reesei	56.58	0.00e+00	1007.00
IUUC-Tvi-122359	Trichoderma virens	57.21	0.00e+00	1019.00
IUUC-Tae-125527	Triticum aestivum	69.30	0.00e+00	1228.00
IUUC-Tur-126754	Triticum urartu	69.05	0.00e+00	1226.00
IUUC-Tme-127170	Tuber melanosporum	48.78	0.00e+00	1188.00
IUUC-Tbe-127882	Tupaia belangeri	66.88	7.00e-123	432.00
IUUC-Ttr-128217	Tursiops truncatus	53.22	0.00e+00	1312.00
IUUC-Uma-129337	Ustilago maydis	56.80	0.00e+00	1019.00
IUUC-Vda-129828	Verticillium dahliae	55.73	0.00e+00	981.00
IUUC-Vpa-130537	Vicugna pacos	54.01	0.00e+00	1353.00
IUUC-Vvi-130958	Vitis vinifera	71.60	0.00e+00	1258.00
IUUC-Xtr-132857	Xenopus tropicalis	53.68	0.00e+00	1263.00
IUUC-Xma-133138	Xiphophorus maculatus	64.05	0.00e+00	1109.00
IUUC-Yli-134399	Yarrowia lipolytica	52.38	0.00e+00	879.00
IUUC-Zma-135612	Zea mays	67.50	0.00e+00	1209.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence