iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043452

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000838

Gene Name

LOC100778336; GLYMA_05G043700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA05G02850	GLYMA05G02850.1	GLYMA05G02850.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.20e-26	90.6	312	349
UBD/Beta-Prp	1.60e-50	173.6	228	513

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtgvl 35
           gHtd+v++++    s++++vs+++D tikvWDl +g +
   Q: 312  GHTDKVCAVDVskiSSRHVVSAAYDRTIKVWDLVKGYC 349
           8*********999977*****************98866 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlsls 101
           +h++ + ++ f  ++s l+tg++d+ +k wd+ tg+l ++l+g+ + v ++++ +d    + +s+ ++++vwd+++g   htl+gh+d+v++++
   Q: 228  AHEGGCASMLFEYNSSKLITGGQDRLVKMWDANTGSLSSTLQGCLGSVLDLTITHDNRSVIAASSSNNLYVWDVNSGRVRHTLTGHTDKVCAVD 321
           5666778899*99********************************************************************************* PP
   S: 102  fsp.sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngke 194
           +s+ s+ ++vs+  drti+vwdl +g+c ++    h +  n ++++ dg+ ++sG+ D+ +rlWd+++gkll +    h  +v+sls+++ng+ 
   Q: 322  VSKiSSRHVVSAAYDRTIKVWDLVKGYCTNT-IIFH-SNCNALSFSMDGQTIFSGHVDGNLRLWDIQSGKLLSEVAA-HSLAVTSLSLSRNGNV 412
           ***777***********************94.3333.358999999999**************************98.**************** PP
   S: 195  lvsgsldgtvklwdlqtgecvrtlnght....dnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlgs 284
           +++ ++d+  +l+d+++ e+  tl++      +n ++   sp+d++++ gs+Dgs++iW + +gd+++tl+ h ssv ++   s  ++ l++++
   Q: 413  VLTSGRDNLHNLFDVRSLEVCGTLKAMGnrvaSNWSRSCISPDDNHVAAGSADGSVYIWSISKGDIVSTLKEHTSSVLCCRW-SGIGKPLASAD 505
           ************************99884444555556677***************************************99.55578899999 PP
   S: 285  edskvniw 292
           ++++v +w
   Q: 506  KNGIVCVW 513
           99999999 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MAKAGKSQEE IASEAIKHTL RALRKRHLLE EAAHAPAVLA LSRPIVSQGS EWKEKEENLQ 60
VELQQCYKAQ SRLSEQLVVE VAESRASKAL LQEKENALAD LQKELTELRD ECSQLKVDLE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCAAATTTT GATAAAGCTA CCCTAGGACC TAGGTTTACA CTTTCTCTTT TCTTTTCTGT 60
GAGAGTGCAG CGTCTTTTCT TCTTTTCAAA ATTCATTCCC TTGCCTTGCA TGCGTTTTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR013923--Autophagy-rel_prot_16
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08614--ATG16
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0000421--C:autophagosome membrane
GO:0000045--P:autophagosome assembly

KEGG

gmx:100778336

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000090	Aegilops tauschii	52.44	1.00e-143	503.00
IUUC-Aml-001470	Ailuropoda melanoleuca	32.78	9.00e-42	164.00
IUUC-Atr-003073	Amborella trichopoda	63.27	5.00e-156	544.00
IUUC-Aly-005435	Arabidopsis lyrata	74.16	0.00e+00	777.00
IUUC-Bta-012388	Bos taurus	33.00	4.00e-46	179.00
IUUC-Bdi-014231	Brachypodium distachyon	53.42	6.00e-151	527.00
IUUC-Cel-018234	Caenorhabditis elegans	27.74	1.00e-32	134.00
IUUC-Cja-020002	Callithrix jacchus	30.70	1.00e-36	148.00
IUUC-Cfa-020484	Canis familiaris	33.99	4.00e-46	179.00
IUUC-Cho-024311	Choloepus hoffmanni	37.50	4.00e-35	142.00
IUUC-Cin-025260	Ciona intestinalis	32.12	1.00e-34	141.00
IUUC-Dno-029728	Dasypus novemcinctus	33.33	2.00e-46	180.00
IUUC-Dor-030897	Dipodomys ordii	29.84	8.00e-43	168.00
IUUC-Ete-032969	Echinops telfairi	33.45	3.00e-44	172.00
IUUC-Fca-036005	Felis catus	33.99	9.00e-46	178.00
IUUC-Fal-037593	Ficedula albicollis	31.37	1.00e-48	187.00
IUUC-Gmo-039042	Gadus morhua	25.10	9.00e-38	151.00
IUUC-Gac-041351	Gasterosteus aculeatus	34.98	9.00e-49	188.00
IUUC-Ggo-045427	Gorilla gorilla	33.77	8.00e-46	178.00
IUUC-Hsa-046632	Homo sapiens	33.77	9.00e-46	178.00
IUUC-Hvu-047655	Hordeum vulgare	52.59	9.00e-119	420.00
IUUC-Itr-048504	Ictidomys tridecemlineatus	29.58	2.00e-52	200.00
IUUC-Lpe-051254	Leersia perrieri	56.56	1.00e-155	543.00
IUUC-Loc-052610	Lepisosteus oculatus	33.88	3.00e-48	186.00
IUUC-Laf-053936	Loxodonta africana	33.33	2.00e-45	177.00
IUUC-Mcc-055504	Macaca mulatta	34.11	4.00e-46	179.00
IUUC-Mtr-058062	Medicago truncatula	84.05	0.00e+00	870.00
IUUC-Mmr-061298	Microcebus murinus	33.77	3.00e-46	179.00
IUUC-Mdo-062969	Monodelphis domestica	33.66	6.00e-47	182.00
IUUC-Mac-065161	Musa acuminata	67.10	0.00e+00	632.00
IUUC-Mpu-066196	Mustela putorius furo	33.66	5.00e-46	179.00
IUUC-Nle-069853	Nomascus leucogenys	32.78	2.00e-43	170.00
IUUC-Opr-071039	Ochotona princeps	32.56	4.00e-42	166.00
IUUC-Ont-072489	Oreochromis niloticus	34.32	3.00e-48	186.00
IUUC-Oan-072703	Ornithorhynchus anatinus	33.33	1.00e-46	181.00
IUUC-Ocu-074205	Oryctolagus cuniculus	33.77	7.00e-46	178.00
IUUC-Oba-075619	Oryza barthii	57.93	7.00e-163	566.00
IUUC-Obr-076632	Oryza brachyantha	56.30	7.00e-154	537.00
IUUC-Ogl-077671	Oryza glaberrima	57.93	7.00e-163	566.00
IUUC-Ogu-078052	Oryza glumaepatula	57.73	1.00e-162	566.00
IUUC-Oin-079611	Oryza indica	58.15	2.00e-160	558.00
IUUC-Ome-081560	Oryza meridionalis	57.96	2.00e-162	565.00
IUUC-Oni-082145	Oryza nivara	57.93	7.00e-163	566.00
IUUC-Oru-084858	Oryza rufipogon	58.15	1.00e-160	559.00
IUUC-Osa-086277	Oryza sativa	58.15	2.00e-160	558.00
IUUC-Ola-086964	Oryzias latipes	36.43	2.00e-41	162.00
IUUC-Ptr-091676	Pan troglodytes	33.77	9.00e-46	178.00
IUUC-Pan-092068	Papio anubis	34.11	5.00e-46	179.00
IUUC-Ppa-095699	Physcomitrella patens	51.60	1.00e-145	509.00
IUUC-Pfo-096067	Poecilia formosa	28.08	2.00e-47	183.00
IUUC-Pab-098111	Pongo abelii	33.77	1.00e-45	177.00
IUUC-Ppe-101790	Prunus persica	83.66	0.00e+00	883.00
IUUC-Pva-102871	Pteropus vampyrus	33.33	2.00e-45	177.00
IUUC-Smo-108983	Selaginella moellendorffii	51.11	5.00e-140	491.00
IUUC-Sly-111009	Solanum lycopersicum	74.68	0.00e+00	756.00
IUUC-Stu-112370	Solanum tuberosum	74.51	0.00e+00	816.00
IUUC-Sar-113109	Sorex araneus	34.93	2.00e-26	113.00
IUUC-Ssc-115271	Sus scrofa	32.42	1.00e-40	160.00
IUUC-Tru-118336	Takifugu rubripes	29.70	1.00e-34	141.00
IUUC-Tsy-119006	Tarsius syrichta	34.11	7.00e-46	178.00
IUUC-Tca-121002	Theobroma cacao	81.89	0.00e+00	864.00
IUUC-Tae-124868	Triticum aestivum	52.44	8.00e-144	503.00
IUUC-Tur-126463	Triticum urartu	52.44	1.00e-143	503.00
IUUC-Ttr-129005	Tursiops truncatus	35.43	1.00e-38	154.00
IUUC-Vvi-130878	Vitis vinifera	77.17	0.00e+00	812.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence