iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121403

Ensembl Protein ID

EOY01806

UniProt Accession

A0A061EA43; A0A061EA43_THECC

Genbank Protein ID

EOY01806.1

Protein Name

Transducin/WD40 repeat-like superfamily protein

Genbank Nucleotide ID

CM001880

Gene Name

TCM_011620

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_011620	EOY01806	EOY01806

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-09	38.4	93	122

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           H d  tc+++ ++ + +++++ D+++  WD
   Q: 93   HDDVATCVEYsNEtRQVITAGFDKKVIAWD 122
           9999******877788************** PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MNGTCLEFEN PIRDAISRIR FSPQSNNLLI SSWDSSLRLY DVECSQLRLE APSEAALLDC 60
CFQEESVVFS AGTDGSITRY DLHSGISNRI GNHDDVATCV EYSNETRQVI TAGFDKKVIA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCTAATACT TTCAAATATG TTATGATTAC TCTATAAATC TTGTCTTAAC TAACAAAAAA 60
TGATAAACAT GTTAAAAATA AAATTCTGGC TTTTGACTTT AGAAGAACTA CAAAGATATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001094	Aegilops tauschii	50.00	1.00e-74	271.00
IUUC-Atr-002604	Amborella trichopoda	52.49	2.00e-85	308.00
IUUC-Aly-006482	Arabidopsis lyrata	56.91	1.00e-94	338.00
IUUC-Ath-007619	Arabidopsis thaliana	58.28	3.00e-94	337.00
IUUC-Bdi-014018	Brachypodium distachyon	50.17	2.00e-81	294.00
IUUC-Bol-016156	Brassica oleracea	58.61	5.00e-101	360.00
IUUC-Bra-017094	Brassica rapa	57.28	7.00e-99	353.00
IUUC-Gma-043687	Glycine max	64.77	6.00e-115	406.00
IUUC-Lpe-051057	Leersia perrieri	49.01	5.00e-81	293.00
IUUC-Mtr-058179	Medicago truncatula	65.07	3.00e-113	400.00
IUUC-Mac-064581	Musa acuminata	53.95	4.00e-86	310.00
IUUC-Oba-075790	Oryza barthii	52.45	1.00e-84	305.00
IUUC-Obr-076040	Oryza brachyantha	54.86	2.00e-87	314.00
IUUC-Ogu-079013	Oryza glumaepatula	46.30	8.00e-80	289.00
IUUC-Oin-080034	Oryza indica	51.72	1.00e-84	306.00
IUUC-Olo-080445	Oryza longistaminata	42.26	2.00e-64	238.00
IUUC-Ome-081933	Oryza meridionalis	47.22	5.00e-82	296.00
IUUC-Oni-082305	Oryza nivara	52.45	6.00e-85	306.00
IUUC-Opu-083254	Oryza punctata	45.79	4.00e-70	257.00
IUUC-Oru-085161	Oryza rufipogon	52.45	6.00e-85	306.00
IUUC-Pop-099762	Populus trichocarpa	70.07	3.00e-126	443.00
IUUC-Ppe-101222	Prunus persica	68.60	5.00e-79	286.00
IUUC-Sit-110260	Setaria italica	49.83	2.00e-76	278.00
IUUC-Sly-111593	Solanum lycopersicum	50.66	3.00e-75	274.00
IUUC-Stu-112000	Solanum tuberosum	60.73	3.00e-104	370.00
IUUC-Sbi-114097	Sorghum bicolor	48.85	2.00e-79	288.00
IUUC-Tae-122702	Triticum aestivum	50.88	5.00e-77	280.00
IUUC-Tur-126104	Triticum urartu	50.52	4.00e-78	283.00
IUUC-Vvi-131179	Vitis vinifera	66.23	2.00e-116	410.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence