iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-080672

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
KN539162.1_FG007	KN539162.1_FGT007	KN539162.1_FGP007

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.10e-32	111.6	36	106

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawcee 71
           ++p++f+CpIsl++Mr Pv l++G+tydr+sI++wl+sg++tcP t+ pl ++dlvPnltlr+li++w ++
   Q: 36   KIPSFFRCPISLDVMRSPVSLCTGVTYDRASIQRWLDSGNTTCPATMLPLPSTDLVPNLTLRSLISHWSSS 106
           58******************************************************************876 PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

MGRKESSSPT TTTTTTTAAT RTSMRLPPQH QALEVKIPSF FRCPISLDVM RSPVSLCTGV 60
TYDRASIQRW LDSGNTTCPA TMLPLPSTDL VPNLTLRSLI SHWSSSPASA ASGDVSVTSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCAGGA AGGAATCGTC GTCGCCGACG ACGACGACAA CGACGACGAC GGCTGCGACG 60
AGGACTAGCA TGAGGCTGCC GCCGCAGCAC CAGGCGCTGG AGGTGAAGAT CCCGAGCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006554	Arabidopsis lyrata	76.81	3.00e-29	121.00
IUUC-Bdi-014454	Brachypodium distachyon	77.44	5.00e-61	227.00
IUUC-Bra-017320	Brassica rapa	73.24	1.00e-28	119.00
IUUC-Gma-043253	Glycine max	77.78	4.00e-26	111.00
IUUC-Hvu-047473	Hordeum vulgare	83.93	7.00e-24	103.00
IUUC-Lpe-050910	Leersia perrieri	74.88	8.00e-61	226.00
IUUC-Mac-064892	Musa acuminata	69.47	1.00e-42	166.00
IUUC-Obr-076177	Oryza brachyantha	79.17	1.00e-64	238.00
IUUC-Ogl-077051	Oryza glaberrima	92.82	2.00e-76	278.00
IUUC-Ogu-078049	Oryza glumaepatula	93.78	2.00e-77	281.00
IUUC-Oin-079501	Oryza indica	90.45	3.00e-64	237.00
IUUC-Oni-082297	Oryza nivara	93.78	2.00e-77	282.00
IUUC-Opu-083968	Oryza punctata	82.61	6.00e-67	247.00
IUUC-Oru-084478	Oryza rufipogon	92.82	2.00e-77	281.00
IUUC-Osa-085354	Oryza sativa	91.87	2.00e-77	282.00
IUUC-Pop-099916	Populus trichocarpa	74.65	2.00e-28	119.00
IUUC-Ppe-101668	Prunus persica	73.24	9.00e-28	117.00
IUUC-Smo-109375	Selaginella moellendorffii	69.35	2.00e-23	102.00
IUUC-Sit-110583	Setaria italica	78.65	1.00e-54	206.00
IUUC-Stu-112738	Solanum tuberosum	74.65	3.00e-29	121.00
IUUC-Sbi-114135	Sorghum bicolor	77.08	4.00e-68	251.00
IUUC-Sre-115187	Sporisorium reilianum	40.43	4.00e-06	44.70
IUUC-Tae-124143	Triticum aestivum	82.98	7.00e-65	240.00
IUUC-Vvi-131249	Vitis vinifera	76.47	2.00e-27	115.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence