iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131249

UUCD1 version

UUC-ViV-00865

Ensembl Protein ID

VIT_18s0166g00190.t01

UniProt Accession

F6HW89; F6HW89_VITVI

Genbank Protein ID

CCB58953.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

FN596264

Gene Name

VIT_18s0166g00190

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_18s0166g00190	VIT_18s0166g00190.t01	VIT_18s0166g00190.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	6.00e-30	103.7	10	81

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +p++f+CpIsl++M+ Pv l++G+tydrssI+ wl++g++tcP t+q l ++d+vPn+tl+rliq w ++++
   Q: 10   IPSFFKCPISLDVMKSPVSLCTGVTYDRSSIQTWLDNGNNTCPATMQILPSKDFVPNHTLQRLIQVWAQSSA 81
           8******************************************************************99875 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MVRNDLFINI PSFFKCPISL DVMKSPVSLC TGVTYDRSSI QTWLDNGNNT CPATMQILPS 60
KDFVPNHTLQ RLIQVWAQSS AVPSPVVSSR QVGAWVADIE NRRFGALPKI LDYASSSDEN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCACACAGC CACGAGCCTT CTCCCAACTT GGTTTCTCTC TGTGTAGCTC TATCGAAGAT 60
GGTGAGGAAC GACCTCTTCA TTAACATTCC GAGCTTTTTC AAGTGTCCCA TTTCTTTGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR008709--Neurochondrin
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF05536--Neurochondrin
PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

vvi:100251262

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Lpe-050910	Leersia perrieri	74.65	4.00e-29	120.00
IUUC-Obr-076177	Oryza brachyantha	74.65	7.00e-29	119.00
IUUC-Ogl-077051	Oryza glaberrima	76.92	3.00e-27	115.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence