iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-120946

Ensembl Protein ID

EOX92415

UniProt Accession

A0A061DIQ7; A0A061DIQ7_THECC

Genbank Protein ID

EOX92415.1

Protein Name

RING zinc finger protein

Genbank Nucleotide ID

CM001879

Gene Name

TCM_001369

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_001369	EOX92415	EOX92415

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.40e-09	37.1	134	176

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+df   ++ +++lp C+H fh  C+ kw       s + +CP Cr
   Q: 134  CIICLSDFtpgDR-VRLLPkCNHGFHVRCIDKW------LSSHSSCPKCR 176
           ********99666.*******************......**********8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MSISISTQLL QHLLGEFHSR RLLLHTPPFE TPTTAAPASP ENNHNSSDPY TGNNSFDANV 60
VMVLSVLLCA LICSLGLNSI IRCALRCTGL VASESGASTS ARLANTGVKR KALKTFPTVN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACCCTGCCT AACTATGTCC ATTTCCATAT CCACTCAACT TCTTCAACAT TTGCTTGGAG 60
AATTCCACTC TAGAAGGTTG CTGCTGCATA CCCCACCTTT TGAAACACCA ACTACAGCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

tcc:TCM_001369

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002440	Amborella trichopoda	47.34	1.00e-35	142.00
IUUC-Aly-006297	Arabidopsis lyrata	63.76	7.00e-65	239.00
IUUC-Ath-006920	Arabidopsis thaliana	61.75	1.00e-61	228.00
IUUC-Bdi-014146	Brachypodium distachyon	50.25	4.00e-46	176.00
IUUC-Bol-016181	Brassica oleracea	58.52	5.00e-59	219.00
IUUC-Bra-017634	Brassica rapa	58.08	1.00e-58	218.00
IUUC-Gma-043693	Glycine max	59.57	1.00e-71	261.00
IUUC-Hvu-047571	Hordeum vulgare	50.49	6.00e-42	162.00
IUUC-Lpe-051348	Leersia perrieri	49.00	5.00e-40	156.00
IUUC-Mtr-058186	Medicago truncatula	70.06	3.00e-66	243.00
IUUC-Mac-065335	Musa acuminata	47.83	5.00e-41	159.00
IUUC-Obr-076307	Oryza brachyantha	46.01	9.00e-35	139.00
IUUC-Olo-080939	Oryza longistaminata	48.68	3.00e-34	137.00
IUUC-Pop-099910	Populus trichocarpa	72.32	8.00e-92	328.00
IUUC-Ppe-101930	Prunus persica	75.00	1.00e-83	301.00
IUUC-Sit-110398	Setaria italica	50.00	5.00e-39	153.00
IUUC-Sly-111257	Solanum lycopersicum	52.59	2.00e-47	181.00
IUUC-Stu-112198	Solanum tuberosum	53.02	4.00e-61	226.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence