• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Tag Content
UUCD2 ID IUUC-Pop-099432
UUCD1 version UUC-PoT-01727
Ensembl Protein ID POPTR_0007s07040.1
UniProt Accession B9HG62; B9HG62_POPTR
Genbank Protein ID EEE90499.1
Protein Name UBIQUITIN-SPECIFIC PROTEASE 27 family protein
Genbank Nucleotide ID CM000343
Gene Name POPTRDRAFT_718963; POPTR_0007s07040g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0007s07040 POPTR_0007s07040.1 POPTR_0007s07040.1
Status Unreviewed
Classification
Family E-Value Score Start End
DUB/USP 3.20e-39 136.2 61 258
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle..kkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkalkkeaeefsgye 88
    Gl+NlgN C++N +LQ+L ++++++++l + ++ e+++ e+ +++ +l+ +l+ l+eel ++++ + spr+++ a++++ ++f+ ++
   Q: 61 GLQNLGNNCFLNVILQALGSCSNFQSFLQKviEEWESFAGEE-WNESLQLTVALAALLEELSviSRESIVLSPRKVMLAMAHYIQNFNLTS 150
    9***************************99986666666665.68999*************988999999********************* PP
   S: 89 qqDaqEflaflldqleeelkk...eknkpkeeeeeedkselsde........aeekkkkknkslisdlFqgqlksqikclecdnvssreep 168
    qqDa+E + +ll++l++e++ k+++ +++ ++++ + ++++++ ++ F+g l+s ++c++c +
   Q: 151 QQDAEEAFLHLLSSLRDEFSDsylPKHHSLADAF-----ASPNCriltpnriEIQSEQERWQQHFLGPFDGILSSILTCQSCST------- 229
    *******************442222222222222.....222223344444455555555566666667777777777777765....... PP
   S: 169 fldlslpvpgkeetkke....slqdcLesftkeeelegenkyycekck 212
    e l+dcL++ft e++e+ y+c++c
   Q: 230 ----------------ErvgcRLEDCLRQFTVSEQVEN---YSCSHCW 258
    ................3333367777777777777774...7777775 PP
   

Organism Populus trichocarpa
Protein Sequence
(Fasta)
MKTNWVSASG LAAVLGVAGL VLALIKDPKS WNLKLSVLPS WLELNQRENN NRPKKLFLLP 60
GLQNLGNNCF LNVILQALGS CSNFQSFLQK VIEEWESFAG EEWNESLQLT VALAALLEEL 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Pop-099432|DUB,USP|Populus trichocarpa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CGGCAATACT CATAGACAAT CTTTTATCTC ACATGAAGAC GAATTGGGTT TCAGCATCTG 60
GGCTTGCAGC TGTTTTGGGG GTTGCTGGTT TGGTGTTGGC TCTAATAAAA GATCCCAAAT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Pop-099432|DUB,USP|Populus trichocarpa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0645--Protease
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG pop:POPTR_0007s07040g
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000204 Aegilops tauschii 38.03 2.00e-28 119.00
IUUC-Atr-002510 Amborella trichopoda 42.31 5.00e-42 165.00
IUUC-Aly-005754 Arabidopsis lyrata 46.10 6.00e-58 217.00
IUUC-Ath-007622 Arabidopsis thaliana 45.10 5.00e-62 231.00
IUUC-Bdi-014795 Brachypodium distachyon 35.78 7.00e-31 127.00
IUUC-Bol-015637 Brassica oleracea 44.98 5.00e-61 228.00
IUUC-Bra-016801 Brassica rapa 43.99 8.00e-59 220.00
IUUC-Gma-043364 Glycine max 54.27 1.00e-66 246.00
IUUC-Hvu-047422 Hordeum vulgare 48.67 5.00e-25 105.00
IUUC-Lpe-051078 Leersia perrieri 39.02 7.00e-43 167.00
IUUC-Mtr-057976 Medicago truncatula 54.30 2.00e-70 259.00
IUUC-Mac-065296 Musa acuminata 42.86 1.00e-38 152.00
IUUC-Oba-075765 Oryza barthii 39.31 2.00e-43 169.00
IUUC-Obr-076005 Oryza brachyantha 41.98 1.00e-49 190.00
IUUC-Ogl-077916 Oryza glaberrima 42.69 1.00e-51 196.00
IUUC-Ogu-078263 Oryza glumaepatula 39.31 2.00e-43 169.00
IUUC-Oin-080096 Oryza indica 42.76 1.00e-26 114.00
IUUC-Olo-080702 Oryza longistaminata 31.19 1.00e-17 85.10
IUUC-Ome-081928 Oryza meridionalis 40.71 1.00e-45 177.00
IUUC-Oni-082424 Oryza nivara 39.31 5.00e-43 168.00
IUUC-Opu-083371 Oryza punctata 43.10 2.00e-45 177.00
IUUC-Oru-085117 Oryza rufipogon 39.31 5.00e-43 168.00
IUUC-Ppa-096015 Physcomitrella patens 32.13 5.00e-25 108.00
IUUC-Ppe-101898 Prunus persica 58.94 1.00e-77 283.00
IUUC-Smo-109191 Selaginella moellendorffii 36.86 4.00e-52 197.00
IUUC-Sit-110442 Setaria italica 43.43 4.00e-42 165.00
IUUC-Sly-110928 Solanum lycopersicum 50.84 5.00e-35 141.00
IUUC-Stu-112223 Solanum tuberosum 52.83 1.00e-32 133.00
IUUC-Sbi-114645 Sorghum bicolor 47.62 3.00e-36 144.00
IUUC-Tca-121660 Theobroma cacao 61.94 1.00e-75 277.00
IUUC-Tae-125383 Triticum aestivum 43.65 3.00e-45 176.00
IUUC-Tur-126458 Triticum urartu 43.65 4.00e-45 175.00
IUUC-Vvi-131177 Vitis vinifera 59.13 2.00e-70 259.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved