iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043244

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000838

Gene Name

GLYMA_05G192100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA05G32541	GLYMA05G32541.1	GLYMA05G32541.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.40e-30	105.5	8	76

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawce 70
           +p+ f+CpIsl+l +dPv+l++G+tydrs+Iekwla g+ tcPvt+q+l++ ++vPn+tlr+li++w++
   Q: 8    IPHLFRCPISLDLLEDPVTLCTGQTYDRSNIEKWLALGNLTCPVTMQKLHDPSIVPNHTLRHLIDQWLQ 76
           899****************************************************************97 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MNESQNAIPH LFRCPISLDL LEDPVTLCTG QTYDRSNIEK WLALGNLTCP VTMQKLHDPS 60
IVPNHTLRHL IDQWLQLCHQ FDPANPEAST IDSLASLKSN IESHESSLEN KFQALGKISL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACGAAT CTCAAAACGC CATTCCCCAT TTATTTAGAT GCCCCATCAG TTTAGACTTG 60
TTGGAAGATC CTGTGACTTT ATGCACTGGC CAAACCTATG ACAGATCAAA CATAGAAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002561	Amborella trichopoda	39.20	3.00e-55	208.00
IUUC-Bdi-014442	Brachypodium distachyon	44.04	3.00e-38	152.00
IUUC-Hvu-047433	Hordeum vulgare	52.41	6.00e-34	136.00
IUUC-Lpe-051453	Leersia perrieri	38.98	1.00e-34	140.00
IUUC-Ogl-077204	Oryza glaberrima	38.67	5.00e-29	122.00
IUUC-Ogu-078726	Oryza glumaepatula	38.67	8.00e-29	121.00
IUUC-Oin-079338	Oryza indica	39.58	6.00e-29	121.00
IUUC-Ome-081303	Oryza meridionalis	38.39	3.00e-33	135.00
IUUC-Oni-082692	Oryza nivara	38.67	2.00e-29	123.00
IUUC-Opu-083613	Oryza punctata	36.22	9.00e-38	150.00
IUUC-Oru-084341	Oryza rufipogon	38.67	6.00e-29	121.00
IUUC-Osa-086241	Oryza sativa	38.22	2.00e-29	123.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence