iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131284

UUCD1 version

UUC-ViV-00908

Ensembl Protein ID

VIT_04s0044g01460.t01

UniProt Accession

F6I0D6; F6I0D6_VITVI

Genbank Protein ID

CCB60402.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

FN596506

Gene Name

VIT_04s0044g01460

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_04s0044g01460	VIT_04s0044g01460.t01	VIT_04s0044g01460.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.00e-31	107.5	8	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           +p+ f+CpIsl+l++dPv+l++G+tydrssIe+wla g+ tcPvt+q+l++ ++vPn+tlr+li++w+++ 
   Q: 8    IPHLFRCPISLDLFTDPVTLSTGQTYDRSSIEQWLAAGNLTCPVTMQKLHDPSMVPNHTLRHLIDQWLQTG 78
           7999****************************************************************985 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MNEAEMVIPH LFRCPISLDL FTDPVTLSTG QTYDRSSIEQ WLAAGNLTCP VTMQKLHDPS 60
MVPNHTLRHL IDQWLQTGQQ VDPESLTVMG PGPSLAAMKC SLQSQESSLE NKLETLKAIR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTCCTCAAT GAACGAGGCT GAAATGGTGA TACCCCACTT GTTCAGATGC CCGATTAGTC 60
TAGACTTGTT TACAGATCCA GTCACTCTAT CCACAGGCCA AACGTACGAT CGGTCCAGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

vvi:100267170

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002561	Amborella trichopoda	47.63	3.00e-70	258.00
IUUC-Bdi-014442	Brachypodium distachyon	47.51	3.00e-40	158.00
IUUC-Gma-043080	Glycine max	60.20	3.00e-114	404.00
IUUC-Hvu-047498	Hordeum vulgare	58.11	5.00e-18	84.30
IUUC-Lpe-051453	Leersia perrieri	48.05	2.00e-39	155.00
IUUC-Mtr-058668	Medicago truncatula	56.53	1.00e-105	375.00
IUUC-Mac-065385	Musa acuminata	49.59	5.00e-81	293.00
IUUC-Oba-075982	Oryza barthii	75.00	6.00e-31	125.00
IUUC-Ogl-077204	Oryza glaberrima	40.00	3.00e-30	125.00
IUUC-Ogu-078726	Oryza glumaepatula	74.67	7.00e-30	124.00
IUUC-Oin-079338	Oryza indica	73.68	3.00e-30	124.00
IUUC-Ome-081303	Oryza meridionalis	39.52	1.00e-36	146.00
IUUC-Oni-082692	Oryza nivara	39.53	3.00e-35	141.00
IUUC-Opu-083613	Oryza punctata	40.05	5.00e-43	167.00
IUUC-Oru-084341	Oryza rufipogon	39.53	6.00e-35	140.00
IUUC-Osa-086241	Oryza sativa	39.37	5.00e-35	141.00
IUUC-Pop-099942	Populus trichocarpa	63.16	1.00e-125	441.00
IUUC-Ppe-101486	Prunus persica	55.58	1.00e-108	385.00
IUUC-Sit-110225	Setaria italica	40.90	7.00e-36	144.00
IUUC-Sly-111154	Solanum lycopersicum	51.39	2.00e-94	338.00
IUUC-Stu-112583	Solanum tuberosum	50.12	1.00e-93	335.00
IUUC-Sbi-114119	Sorghum bicolor	41.48	4.00e-45	174.00
IUUC-Tca-121526	Theobroma cacao	60.69	2.00e-93	334.00
IUUC-Tae-122999	Triticum aestivum	40.05	3.00e-42	164.00
IUUC-Uma-129520	Ustilago maydis	40.48	6.00e-07	47.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence