iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014255

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000884

Gene Name

LOC100845766; BRADI_5g14110

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI5G14110	BRADI5G14110.1	BRADI5G14110.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.30e-30	104.5	278	350

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +pee++CpIsl+lM dPvv++sG+ty+r++Iekw++sg++tcP+tr++l++  ++Pn+ ++ li +wce+n++
   Q: 278  PPEELRCPISLQLMYDPVVIASGQTYERACIEKWFSSGNTTCPKTRKQLSQLCMTPNYCIKGLIASWCEQNRV 350
           59********************************************************************986 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MERAEVDVDF TVPDNWKLHG ELCKKLYKIV HEVSNAIPAL ESTRPGSSSG LLALSSLRIA 60
VDKAKNLLQY CSECSKLYLA LSAECALSKF EKARDALLES LHQLEETLPE AIDSQIPEIA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGAGAG CTGAGGTCGA TGTGGACTTT ACTGTTCCTG ACAATTGGAA GGTAATCCAG 60
TTAATCCCCT CATTCATCCG AAAGCTACTA ATTCTGTGTT GTTTGTACGA TTGGAATTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000137	Aegilops tauschii	83.33	0.00e+00	1106.00
IUUC-Hvu-047784	Hordeum vulgare	80.31	0.00e+00	1107.00
IUUC-Lpe-051367	Leersia perrieri	71.39	0.00e+00	974.00
IUUC-Oba-075113	Oryza barthii	71.68	0.00e+00	984.00
IUUC-Obr-076015	Oryza brachyantha	68.14	0.00e+00	974.00
IUUC-Ogl-077487	Oryza glaberrima	71.68	0.00e+00	985.00
IUUC-Ogu-078548	Oryza glumaepatula	71.81	0.00e+00	986.00
IUUC-Oin-079540	Oryza indica	71.81	0.00e+00	986.00
IUUC-Olo-080654	Oryza longistaminata	71.79	0.00e+00	976.00
IUUC-Ome-081838	Oryza meridionalis	68.55	0.00e+00	997.00
IUUC-Oni-082806	Oryza nivara	71.81	0.00e+00	986.00
IUUC-Opu-083802	Oryza punctata	72.44	0.00e+00	989.00
IUUC-Oru-084879	Oryza rufipogon	71.81	0.00e+00	986.00
IUUC-Osa-085564	Oryza sativa	71.81	0.00e+00	986.00
IUUC-Sit-110478	Setaria italica	69.98	0.00e+00	979.00
IUUC-Sbi-114006	Sorghum bicolor	64.21	0.00e+00	896.00
IUUC-Tae-123859	Triticum aestivum	80.73	0.00e+00	1121.00
IUUC-Tur-126528	Triticum urartu	84.08	0.00e+00	1076.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence