iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.4__1261__AT2G32700.1	fgenesh2_kg.4__1261__AT2G32700.1	fgenesh2_kg.4__1261__AT2G32700.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.60e-31	105.7	552	581
UBD/Beta-Prp	6.90e-48	164.0	504	632

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           H+  +t+++f ++ t l+++s D+tik+WD
   Q: 552  HAHIITDVRFrPNsTQLATSSFDKTIKIWD 581
           8889*******777**************** PP

UBD/Beta-Prp

   S: 87   vhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrl 163
           v+++++  ++v +++fs +g+ l+s++hd+ + +w++et q+ + t ++h ++++ v++ p++  l+++s D+t+++
   Q: 504  VSSIRKSASKVICCNFSSDGKLLASAGHDKKVFIWNMETLQVES-TPEEHAHIITDVRFRPNSTQLATSSFDKTIKI 579
           778889999**********************************9.******************************** PP
   S: 164  Wdl.ktgkllrtltgghtdsvyslsfdsng.kelvsgsldgtvklwdlqtgecvr 216
           Wd    g  lrt +g h  +v s++f++++ + l s++ ++++++wd+ + +cvr
   Q: 580  WDAsDPGYFLRTISG-HAAPVMSIDFHPKKtELLCSCDSNNDIRFWDINA-SCVR 632
           **9677999****99.************9956678*************54.4776 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MAQGNWEADK MLDVYIYDYL VKKKLHNTAK SFMTEGKVSP DPVAIDAPGG FLFEWWSVFW 60
DIFIARTNEK HSEAAAAYIE AQQGKAKEQQ MQIQQLQMMR QAQMQRRDPN HPSLGGPMNA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCAATCTGAT CTCTCTCTCT CTTCCAGCTG TTTCATGATC GATTTACTCT AAGTTACAGC 60
TGAATACAAT TCACTGTAAT CTCTCAAGAA CCCTAGATTT CTCCCTTTTT TCAATTGTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00667--LisH
SM00320--WD40

KEGG

aly:ARALYDRAFT_482201

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000776	Aegilops tauschii	60.80	1.00e-142	499.00
IUUC-Atr-002717	Amborella trichopoda	65.26	4.00e-150	524.00
IUUC-Ath-007671	Arabidopsis thaliana	93.93	0.00e+00	1369.00
IUUC-Bdi-014855	Brachypodium distachyon	60.71	0.00e+00	897.00
IUUC-Bol-016419	Brassica oleracea	84.24	0.00e+00	1224.00
IUUC-Bra-017537	Brassica rapa	81.56	0.00e+00	1184.00
IUUC-Gma-044008	Glycine max	71.21	0.00e+00	1035.00
IUUC-Hvu-047358	Hordeum vulgare	61.24	5.00e-151	526.00
IUUC-Lpe-051527	Leersia perrieri	61.39	0.00e+00	886.00
IUUC-Mtr-058582	Medicago truncatula	73.27	0.00e+00	1013.00
IUUC-Mac-064608	Musa acuminata	59.85	0.00e+00	863.00
IUUC-Oba-075243	Oryza barthii	60.68	0.00e+00	877.00
IUUC-Obr-076847	Oryza brachyantha	60.90	0.00e+00	873.00
IUUC-Ogl-076931	Oryza glaberrima	62.24	0.00e+00	919.00
IUUC-Ogu-077963	Oryza glumaepatula	60.42	0.00e+00	871.00
IUUC-Oin-079144	Oryza indica	61.87	0.00e+00	912.00
IUUC-Olo-080947	Oryza longistaminata	58.74	0.00e+00	831.00
IUUC-Ome-081723	Oryza meridionalis	59.51	0.00e+00	863.00
IUUC-Oni-083067	Oryza nivara	61.87	0.00e+00	914.00
IUUC-Opu-083429	Oryza punctata	62.16	0.00e+00	917.00
IUUC-Oru-084534	Oryza rufipogon	60.67	0.00e+00	873.00
IUUC-Osa-085788	Oryza sativa	62.24	0.00e+00	917.00
IUUC-Pop-099951	Populus trichocarpa	71.79	0.00e+00	1044.00
IUUC-Ppe-101896	Prunus persica	70.04	0.00e+00	974.00
IUUC-Smo-109593	Selaginella moellendorffii	45.12	2.00e-174	605.00
IUUC-Sit-110618	Setaria italica	61.35	0.00e+00	897.00
IUUC-Sly-111127	Solanum lycopersicum	62.11	0.00e+00	879.00
IUUC-Stu-112404	Solanum tuberosum	60.63	0.00e+00	889.00
IUUC-Sbi-114046	Sorghum bicolor	63.14	0.00e+00	922.00
IUUC-Tca-121754	Theobroma cacao	72.47	0.00e+00	1049.00
IUUC-Tae-125446	Triticum aestivum	60.66	0.00e+00	901.00
IUUC-Tur-126636	Triticum urartu	59.27	0.00e+00	800.00
IUUC-Vvi-130936	Vitis vinifera	65.54	0.00e+00	940.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence