iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114384

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000765

Gene Name

SORBI_006G219000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb06g028850	Sb06g028850.1	Sb06g028850.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.80e-37	124.2	276	312

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsd.tllvsGsdDgtikvWDlrtgvllk 37
           gH+++vt+la+ d  ++ sGs+D t++vWD  + ++++
   Q: 276  GHEGPVTSLAL-DsLRIYSGSWDMTVRVWDRAQMDCVQ 312
           8**********.4499**************77777765 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAFDCNKERG DSSPDNCSRI CTEGTLVQAN PLSHYWKPKG LKSLNKLENQ KSSHGSVPRD 60
DNPEQEAEAS DEASASTCGI RCFTDLPAAL VCEVLARLDA KDLGIVSCVS TLLHALATDH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGAGATTAA TCTCGAGGTT GGACCTCACA ATTTTATGGC CTTTGACTGC AACAAGGAAA 60
GAGGAGATTC TTCGCCTGAT AATTGCTCCC GCATTTGCAC TGAGGGTACT CTCGTCCAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001810--F-box_dom
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50181--FBOX
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00646--F-box
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00256--FBOX
SM00320--WD40

Gene Ontology

GO:0016036--P:cellular response to phosphate starvation

KEGG

sbi:SORBI_06g028850

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000413	Aegilops tauschii	75.75	0.00e+00	885.00
IUUC-Atr-002870	Amborella trichopoda	48.39	4.00e-133	467.00
IUUC-Aly-005424	Arabidopsis lyrata	55.00	2.00e-151	528.00
IUUC-Ath-007005	Arabidopsis thaliana	55.00	2.00e-152	531.00
IUUC-Bdi-014622	Brachypodium distachyon	76.81	0.00e+00	886.00
IUUC-Bol-016449	Brassica oleracea	54.58	2.00e-149	521.00
IUUC-Bra-017684	Brassica rapa	54.90	2.00e-108	384.00
IUUC-Gma-044132	Glycine max	57.64	3.00e-152	531.00
IUUC-Hvu-047789	Hordeum vulgare	74.87	0.00e+00	874.00
IUUC-Lpe-051245	Leersia perrieri	72.39	0.00e+00	828.00
IUUC-Mtr-058000	Medicago truncatula	57.06	3.00e-156	544.00
IUUC-Mac-065354	Musa acuminata	60.53	3.00e-179	620.00
IUUC-Oba-074979	Oryza barthii	76.68	0.00e+00	884.00
IUUC-Obr-076615	Oryza brachyantha	77.35	0.00e+00	891.00
IUUC-Ogl-077075	Oryza glaberrima	76.68	0.00e+00	886.00
IUUC-Ogu-078476	Oryza glumaepatula	76.50	0.00e+00	882.00
IUUC-Oin-079267	Oryza indica	76.68	0.00e+00	883.00
IUUC-Olo-080272	Oryza longistaminata	76.86	0.00e+00	885.00
IUUC-Ome-081994	Oryza meridionalis	76.86	0.00e+00	886.00
IUUC-Oni-082607	Oryza nivara	76.68	0.00e+00	883.00
IUUC-Opu-083533	Oryza punctata	77.52	0.00e+00	894.00
IUUC-Oru-084485	Oryza rufipogon	76.68	0.00e+00	881.00
IUUC-Osa-085675	Oryza sativa	76.68	0.00e+00	882.00
IUUC-Ppa-095179	Physcomitrella patens	42.38	2.00e-105	375.00
IUUC-Pop-099631	Populus trichocarpa	52.53	3.00e-160	557.00
IUUC-Ppe-102090	Prunus persica	59.14	1.00e-168	585.00
IUUC-Smo-108901	Selaginella moellendorffii	42.35	1.00e-98	352.00
IUUC-Sit-110702	Setaria italica	86.23	0.00e+00	988.00
IUUC-Sly-110878	Solanum lycopersicum	57.64	3.00e-155	541.00
IUUC-Stu-112399	Solanum tuberosum	57.70	8.00e-152	529.00
IUUC-Tca-121388	Theobroma cacao	60.16	1.00e-161	562.00
IUUC-Tae-125186	Triticum aestivum	75.75	0.00e+00	884.00
IUUC-Tur-126520	Triticum urartu	75.13	0.00e+00	878.00
IUUC-Vvi-131268	Vitis vinifera	59.63	6.00e-159	553.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence