iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112399

Ensembl Protein ID

PGSC0003DMT400070470

UniProt Accession

M1CM89; M1CM89_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400027398	PGSC0003DMT400070470	PGSC0003DMT400070470

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.90e-32	109.0	271	306

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclafsd.tllvsGsdDgtikvWDlrtgvllk 37
           H++++tcla+ d + + sGs+D +i+vWD ++ ++lk
   Q: 271  HEGPITCLAL-DlNKMYSGSWDMSIRVWDRSSLKCLK 306
           9*********.8899**************88888876 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MEFECQRGTK IGLEDCSIDC VDYPCREKVD TSFIEPSKNP KSFIFDSEKQ NSLWRLDGKG 60
GSLSLKCKEL LAVNEVLPDC RSITDLPPAL ISEILNCLEP KELGVVSCVN ASLYRLASEH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATAAATCTCA GCTAGTACTC TCACCCAATC TCTCAAATTC ACCAAAATTT ATTTTTCCCC 60
AAAATTCGAA TCCCTAAAAT TTTCAAAGCA ATTTCGGAAG CCATTGTTCT TCTTCTTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001810--F-box_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50181--FBOX
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00646--F-box
PF00400--WD40

SMART

SM00256--FBOX
SM00320--WD40

KEGG

sot:102587434

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000413	Aegilops tauschii	56.85	2.00e-164	572.00
IUUC-Atr-002870	Amborella trichopoda	51.86	3.00e-137	480.00
IUUC-Aly-005424	Arabidopsis lyrata	62.87	0.00e+00	636.00
IUUC-Ath-007005	Arabidopsis thaliana	63.27	0.00e+00	642.00
IUUC-Bdi-014622	Brachypodium distachyon	57.85	3.00e-170	590.00
IUUC-Bol-016449	Brassica oleracea	66.32	0.00e+00	644.00
IUUC-Bra-017684	Brassica rapa	64.71	3.00e-131	460.00
IUUC-Gma-044132	Glycine max	59.79	0.00e+00	650.00
IUUC-Hvu-047789	Hordeum vulgare	50.95	2.00e-166	577.00
IUUC-Lpe-051245	Leersia perrieri	54.62	1.00e-156	545.00
IUUC-Mtr-058000	Medicago truncatula	58.65	0.00e+00	639.00
IUUC-Mac-065354	Musa acuminata	61.33	3.00e-171	593.00
IUUC-Oba-074979	Oryza barthii	56.82	4.00e-166	577.00
IUUC-Obr-076615	Oryza brachyantha	57.91	6.00e-170	589.00
IUUC-Ogl-077075	Oryza glaberrima	56.82	1.00e-166	578.00
IUUC-Ogu-078476	Oryza glumaepatula	56.82	6.00e-167	579.00
IUUC-Oin-079267	Oryza indica	57.03	4.00e-167	580.00
IUUC-Olo-080272	Oryza longistaminata	57.03	5.00e-167	579.00
IUUC-Ome-081994	Oryza meridionalis	56.94	5.00e-166	576.00
IUUC-Oni-082607	Oryza nivara	57.03	4.00e-167	580.00
IUUC-Opu-083533	Oryza punctata	56.44	2.00e-167	580.00
IUUC-Oru-084485	Oryza rufipogon	57.03	7.00e-167	579.00
IUUC-Osa-085675	Oryza sativa	57.03	6.00e-167	579.00
IUUC-Pop-099631	Populus trichocarpa	63.77	0.00e+00	687.00
IUUC-Ppe-102090	Prunus persica	60.18	0.00e+00	691.00
IUUC-Smo-108901	Selaginella moellendorffii	44.93	9.00e-105	372.00
IUUC-Sit-110702	Setaria italica	58.17	3.00e-164	570.00
IUUC-Sly-110878	Solanum lycopersicum	96.23	0.00e+00	1073.00
IUUC-Sbi-114384	Sorghum bicolor	57.49	4.00e-160	556.00
IUUC-Tca-121388	Theobroma cacao	69.32	0.00e+00	685.00
IUUC-Tae-125186	Triticum aestivum	56.85	1.00e-164	572.00
IUUC-Tur-126520	Triticum urartu	56.78	2.00e-163	568.00
IUUC-Vvi-131268	Vitis vinifera	69.38	0.00e+00	642.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence