iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131513

UUCD1 version

UUC-ViV-00795

Ensembl Protein ID

VIT_08s0040g02950.t01

UniProt Accession

F6HQW4; F6HQW4_VITVI

Genbank Protein ID

CCB57012.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596008

Gene Name

VIT_08s0040g02950

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_08s0040g02950	VIT_08s0040g02950.t01	VIT_08s0040g02950.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.10e-06	26.7	212	253

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC+e++   +d ++ lpC H+fh  C+  w        k+ +CP Cr
   Q: 212  CVICKEEMrqgRD-VCELPCEHLFHWMCILPW------LVKRNTCPCCR 253
           ********77444.******************......**********8 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MAEGQNSTEA IIMSALSTLS ATQISHLTRC VYSILRYHHL RLSSLLSSPT IFAHTLHHLH 60
SISLPHKTLL IARHLLSTLH HLTRFFQSTV PPPYSRTSLK LRDLDAVLLL LLLCQLRQHD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAGAGTGGG CATGGAGAAG AGGAGGATGG GCAAATCAGT CAGTGAAATA CTCCATAAAG 60
GCCAAACATT CCTCAGACTC TTGAGTTCAT TCATTCGGGG CATTCCGTAA TGGCAGAAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0009501--C:amyloplast
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0009630--P:gravitropism
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

vvi:104880042

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005538	Arabidopsis lyrata	46.39	9.00e-41	159.00
IUUC-Ath-006921	Arabidopsis thaliana	47.90	6.00e-40	156.00
IUUC-Bdi-014905	Brachypodium distachyon	40.12	2.00e-26	111.00
IUUC-Bol-016141	Brassica oleracea	53.05	7.00e-44	169.00
IUUC-Bra-017782	Brassica rapa	57.67	4.00e-43	167.00
IUUC-Gma-043966	Glycine max	59.64	2.00e-51	194.00
IUUC-Lpe-051463	Leersia perrieri	45.00	9.00e-34	135.00
IUUC-Mac-065543	Musa acuminata	41.78	5.00e-30	123.00
IUUC-Oba-075686	Oryza barthii	43.51	8.00e-29	119.00
IUUC-Ogu-078394	Oryza glumaepatula	43.51	8.00e-29	119.00
IUUC-Oin-079750	Oryza indica	42.50	3.00e-29	120.00
IUUC-Oni-082513	Oryza nivara	42.50	3.00e-29	121.00
IUUC-Oru-084366	Oryza rufipogon	43.51	1.00e-28	119.00
IUUC-Osa-085930	Oryza sativa	42.50	2.00e-29	121.00
IUUC-Pop-099681	Populus trichocarpa	57.41	1.00e-46	178.00
IUUC-Sly-111721	Solanum lycopersicum	56.63	2.00e-58	218.00
IUUC-Stu-112332	Solanum tuberosum	50.00	7.00e-46	176.00
IUUC-Sbi-114490	Sorghum bicolor	43.05	2.00e-19	88.20
IUUC-Tca-121044	Theobroma cacao	62.83	2.00e-61	228.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence