iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lpe-051041

Ensembl Protein ID

LPERR05G16440.1

UniProt Accession

A0A0D9WHU6; A0A0D9WHU6_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
LPERR05G16440	LPERR05G16440.1	LPERR05G16440.1
LPERR05G16440	LPERR05G16440.2	LPERR05G16440.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-22	79.7	245	279
UBD/Beta-Prp	3.00e-42	145.7	80	307

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgv 34
           gH ++vt+++f  +d +l++++ Dg +k+WDlr+++
   Q: 245  GHVGPVTAMSFseNDYFLATAAFDG-VKLWDLRKFT 279
           8**********9888999******7.8*****9875 PP

UBD/Beta-Prp

   S: 16   vkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw...dlstgkcvhtlkghedsvlslsfspsg 106
           ++++p+k+++atg+ d  + ++d+ + + l  l gh++++t++kf +++++l+tgs D+t ++w   + ++++c+htlk h+++v  +++++ +
   Q: 80   MDIHPSKDIVATGGVDTNVVLFDWPSRQILCMLTGHSKKITSLKFVNRDELLLTGSADKTDRIWlesEDRNYSCIHTLKHHTAEVENVTVHAVQ 173
           6789************************************************************965555************************ PP
   S: 107  dklvsGshdrtirvwdletgqclee.tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgs 199
           +++v++s+d+t  ++d++t  cl +  ++  ++  +++++hpdg +l +G++D+++++Wdl+t++ + + +g h ++v+ +sf++n  +l++++
   Q: 174  NYFVTASKDNTWCLYDISTLHCLAKvGEASGQEGYTSASFHPDGLILGTGTNDSVLKFWDLRTQSNVAKIEG-HVGPVTAMSFSENDYFLATAA 266
           ************************9745555667889**********************************9.**************9999999 PP
   S: 200  ldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssD 243
            dg vklwdl++ +  rt+ +  +n    +fs  + +++ g+sD
   Q: 267  FDG-VKLWDLRKFTSFRTYADTPTNAVEFDFS--GSYIAIGGSD 307
           998.9******99999**99888877777777..9999999998 PP

Organism

Leersia perrieri

Protein Sequence
(Fasta)

MLTRLVKQAK VAYNAEKARE AASDHEIGSD GKKIHPGINP VMIDEDTVPP TLAPIDALER 60
YTQISIHPLH RTNIPGILPM DIHPSKDIVA TGGVDTNVVL FDWPSRQILC MLTGHSKKIT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTGACCC GTTTGGTCAA GCAGGCCAAA GTGGCTTATA ATGCTGAGAA AGCACGTGAA 60
GCTGCAAGTG ATCATGAAAT TGGTTCTGAT GGGAAGAAGA TTCATCCTGG AATCAACCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence