iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017519

Ensembl Protein ID

Bra024178.1-P

UniProt Accession

M4E5X4; M4E5X4_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra024178	Bra024178.1	Bra024178.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.20e-07	32.3	126	168

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+ f+    +++lp C H+fh  C+ +w         +++CPlCr
   Q: 126  CSVCLSKFESVeiLRLLPkCRHAFHIGCIDQW------LEEHATCPLCR 168
           ********6623355666**************......**********8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MYLIFFFILT TIHSYYYVSA QPPPPPLTNG DLVANFEPSL AVVTVVLAIM FSLTFFLLVY 60
AKCCHIDLRS RTGEGRRQDR RIIQGIFVNR SANSSDRFSG LDKTVIESLP LFRFSALKGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTATCTAA TCTTTTTCTT CATTCTGACA ACCATCCACA GCTATTACTA TGTCTCTGCT 60
CAGCCTCCTC CTCCTCCGCT CACAAACGGC GACCTCGTCG CCAACTTTGA GCCGAGTTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005935	Arabidopsis lyrata	79.13	0.00e+00	642.00
IUUC-Ath-007561	Arabidopsis thaliana	78.85	2.00e-178	617.00
IUUC-Bol-015814	Brassica oleracea	91.13	0.00e+00	769.00
IUUC-Gma-043589	Glycine max	47.85	2.00e-89	322.00
IUUC-Hvu-047489	Hordeum vulgare	34.56	3.00e-44	172.00
IUUC-Lpe-051018	Leersia perrieri	33.25	2.00e-45	176.00
IUUC-Obr-076167	Oryza brachyantha	33.45	7.00e-35	140.00
IUUC-Oru-084787	Oryza rufipogon	32.73	2.00e-39	155.00
IUUC-Pop-099837	Populus trichocarpa	45.60	5.00e-84	304.00
IUUC-Sit-110634	Setaria italica	35.28	2.00e-55	209.00
IUUC-Stu-111967	Solanum tuberosum	46.60	4.00e-83	301.00
IUUC-Tsy-119338	Tarsius syrichta	43.18	8.00e-14	72.00
IUUC-Tca-121197	Theobroma cacao	48.18	5.00e-97	347.00
IUUC-Tae-125327	Triticum aestivum	32.23	1.00e-41	163.00
IUUC-Vvi-131412	Vitis vinifera	45.89	5.00e-88	318.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence