iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lpe-051696

Ensembl Protein ID

LPERR06G02590.1

UniProt Accession

A0A0D9WLQ6; A0A0D9WLQ6_9ORYZ

Protein Name

Pectate lyase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
LPERR06G02590	LPERR06G02590.1	LPERR06G02590.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.10e-07	31.3	521	564

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf....kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+        +++ + CgH fha C+++w      ++ + +CP+Cr
   Q: 521  CPVCLDGSggdaAAPWKETACGHRFHARCVERW------AKLKGSCPVCR 564
           ******99877766688899*************......**********8 PP

Organism

Leersia perrieri

Protein Sequence
(Fasta)

MACSVVVVTW APLCFFSILF FYLLATATAT ATHARNITAD DEYWAARSHN LAAYVTDPIT 60
TLNKFNAAVL NTTTTSSPPA TSSRRSLMMK RKFRGPCTST NPIDRCWRCR NNWAKHRKRL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCACACCTC GCTCGCTCCG GCCGATCGAT GCCGGCTTCG TCCGGCCGGG AATAGGTCTC 60
AGAATCCCTA GGCAAAATAG CCACACATTT CCTGAGACCC CATTCCCGGA TCGCGACACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0106--Calcium
KW-0181--Complete proteome
KW-0456--Lyase
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0732--Signal

Interpro

IPR002022--Amb_allergen_dom
IPR018082--AmbAllergen
IPR007524--Pec_lyase_N
IPR012334--Pectin_lyas_fold
IPR011050--Pectin_lyase_fold/virulence
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF00544--Pec_lyase_C
PF04431--Pec_lyase_N
PF13639--zf-RING_2

PRINTS

PR00807--AMBALLERGEN

SMART

SM00656--Amb_all
SM00184--RING

Gene Ontology

GO:0030570--F:pectate lyase activity
GO:0008270--F:zinc ion binding
GO:0045490--P:pectin catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001142	Aegilops tauschii	43.16	6.00e-18	82.80
IUUC-Bol-015726	Brassica oleracea	52.09	5.00e-114	404.00
IUUC-Ogl-077541	Oryza glaberrima	40.11	9.00e-22	95.90
IUUC-Ogu-078975	Oryza glumaepatula	44.25	1.00e-26	111.00
IUUC-Oin-079258	Oryza indica	42.86	1.00e-26	112.00
IUUC-Olo-080323	Oryza longistaminata	45.31	4.00e-23	99.80
IUUC-Oni-082226	Oryza nivara	42.70	6.00e-26	109.00
IUUC-Oru-084850	Oryza rufipogon	43.26	2.00e-26	111.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence